RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SLC36A2Q495M3 483 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 FAM27BQ5VT28 67 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 OR7E24Q6IFN5 339 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 TMEM154Q6P9G4 183 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 PLEKHG7Q6ZR37 379 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 Q6ZT83 130 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 FOXL2NBQ6ZUU3 175 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 SEM1Q6ZVN7 128 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-218ENST00000556343 SYT9Q86SS6 491 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-218ENST00000556343 TIGD4Q8IY51 512 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 KLHL36Q8N4N3 616 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 GJC3Q8NFK1 279 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 SLC26A10Q8NG04 563 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 OR4F15Q8NGB8 312 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 OR6N2Q8NGY6 317 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 THEM6Q8WUY1 208 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 ASB5Q8WWX0 329 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 C11orf40Q8WZ69 217 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 RORBQ92753 470 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 KISS1RQ969F8 398 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-218ENST00000556343 STARD4Q96DR4 205 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 USB1Q9BQ65 265 aaKnown RBP8.13□□□□□ -1.11
ACTN1-218ENST00000556343 MND1Q9BWT6 205 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 JAM3Q9BX67 310 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 C1orf198Q9H425 327 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 TMEM38BQ9NVV0 291 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 GALNT8Q9NY28 637 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 TAS2R16Q9NYV7 291 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 COQ3Q9NZJ6 369 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 TINAGQ9UJW2 476 aa8.13□□□□□ -1.11
ACTN1-218ENST00000556343 CAB39Q9Y376 341 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-218ENST00000556343 BSNQ9UPA5 3926 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TMEM129A0AVI4 362 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TRIM64A6NGJ6 449 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 B8ZZF3 427 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SELENOFO60613 162 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 IGHV3-9P01782 118 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 IGHA1P01876 353 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 MT-ND2P03891 347 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 KRT8P05787 483 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 GAAP10253 952 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ATP6V1B1P15313 513 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 NTF4P34130 210 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ARF1P84077 181 aaKnown RBP8.12□□□□□ -1.11
ACTN1-218ENST00000556343 EGR3Q06889 387 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SCRN3Q0VDG4 424 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 EIF2B1Q14232 305 aaKnown RBP8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TAF13Q15543 124 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 PHYHD1Q5SRE7 291 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 C1QTNF12Q5T7M4 302 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TMEM53Q6P2H8 277 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 B3GLCTQ6Y288 498 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 C3P1Q6ZMU1 363 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF813Q6ZN06 617 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 RHOUQ7L0Q8 258 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SSX8Q7RTT4 187 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SLC16A14Q7RTX9 510 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 DPY19L4Q7Z388 723 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 FAM220AQ7Z4H9 259 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 BTLAQ7Z6A9 289 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 CDC20BQ86Y33 519 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SPARTQ8N0X7 666 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 SLC22A24Q8N4F4 322 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 OR52N1Q8NH53 320 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 OTOSQ8NHW6 89 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ALKBH3Q96Q83 286 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-218ENST00000556343 TBX5Q99593 518 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ALG8Q9BVK2 526 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 MROQ9BYG7 248 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 RNF121Q9H920 327 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 MOV10Q9HCE1 1003 aaKnown RBP8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 ELOVL5Q9NYP7 299 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 MALT1Q9UDY8 824 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 PRSS50Q9UI38 385 aa8.12□□□□□ -1.11
ACTN1-218ENST00000556343 BOD1L1Q8NFC6 3051 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ALPK2Q86TB3 2170 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 GTF3C1Q12789 2109 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 IGKV1D-43A0A0B4J1Z2 117 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 J3QRE1 110 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ZNF254O75437 659 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 TNFSF13O75888 250 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 SULT1C4O75897 302 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 TOXO94900 526 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 UBL3O95164 117 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 APOL3O95236 402 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 CGAP01215 116 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 APOC1P02654 83 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 TFP02787 698 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 MT-ND5P03915 603 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 ALOX5APP20292 161 aa8.11□□□□□ -1.11
ACTN1-218ENST00000556343 C21orf33P30042 268 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-218ENST00000556343 CDAP32320 146 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms