RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 OR6M1Q8NGM8 313 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 RLN3Q8WXF3 142 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ATOH1Q92858 354 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SLC25A28Q96A46 364 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SFXN2Q96NB2 322 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ZNF587Q96SQ5 575 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 NRSN2Q9GZP1 204 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OPN4Q9UHM6 478 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 I3L521 148 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 PNPP00491 289 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 PLGP00747 810 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CTLA4P16410 223 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ACHEP22303 614 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 TAS2R19P59542 299 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SEC61A1P61619 476 aaKnown RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 MFSD13AQ14CX5 517 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 NSDHLQ15738 373 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 DEFB133Q30KQ1 61 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 B3GNTL1Q67FW5 361 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OR5M10Q6IEU7 315 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 TMEM229BQ8NBD8 167 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 OR1L3Q8NH93 324 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 TMEM234Q8WY98 164 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-222ENST00000555774 SLC22A13Q9Y226 551 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 R4GMQ9 66 aa12.14□□□□□ -0.47
SHMT2-222ENST00000555774 CDH23Q9H251 3354 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 A0A1W2PPC1 479 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 CDC14CA4D256 554 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 ZSCAN5BA6NJL1 495 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 NPIPB13A6NJU9 1138 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 NPIPB4C9JG80 1138 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 F5H5P2 479 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 GMFGO60234 142 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 B3GALNT1O75752 331 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 ISG15P05161 165 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 LPLP06858 475 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 GABRA1P14867 456 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 HTR2CP28335 458 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 ZP4Q12836 540 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 COL19A1Q14993 1142 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 STEAP1BQ6NZ63 245 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 CADM4Q8NFZ8 388 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 PTX4Q96A99 478 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 POTEKPQ9BYX7 375 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 ATG5Q9H1Y0 275 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 C1orf198Q9H425 327 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-222ENST00000555774 SEMA5BQ9P283 1151 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 DHCR7Q9UBM7 475 aaKnown RBP12.13□□□□□ -0.47
SHMT2-222ENST00000555774 LRP12Q9Y561 859 aa12.13□□□□□ -0.47
SHMT2-222ENST00000555774 SRSF10O75494 262 aaKnown RBP12.12□□□□□ -0.47
SHMT2-222ENST00000555774 RLN1P04808 185 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ENPP1P22413 925 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 S100A11P31949 105 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 PTGS2P35354 604 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 EFNA3P52797 238 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ARHGAP40Q5TG30 622 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ADGRE4PQ86SQ3 457 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 BIVMQ86UB2 503 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 PLXDC1Q8IUK5 500 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 GABRG1Q8N1C3 465 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ZNF248Q8NDW4 579 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 OR52B4Q8NGK2 314 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 EDAQ92838 391 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 SLC41A2Q96JW4 573 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 HHLA2Q9UM44 414 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 GTF2A1LQ9UNN4 478 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 A0A1B0GX78 115 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 FTCDNL1E5RQL4 147 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 NUDT21O43809 227 aaKnown RBP12.12□□□□□ -0.47
SHMT2-222ENST00000555774 RP2O75695 350 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 KDM4BO94953 1096 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 PMS2P2O95744 297 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ITGB2P05107 769 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 CALCRP30988 508 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 DAP3P51398 398 aaKnown RBP12.12□□□□□ -0.47
SHMT2-222ENST00000555774 GMFBP60983 142 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 GUCA2AQ02747 115 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 BAMBIQ13145 260 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 TDGQ13569 410 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 PCK2Q16822 640 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 OR7E24Q6IFN5 339 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 DEGS2Q6QHC5 323 aa12.12□□□□□ -0.47
SHMT2-222ENST00000555774 ZNF704Q6ZNC4 412 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-222ENST00000555774 KMT5CQ86Y97 462 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms