RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 IQCKQ8N0W5 287 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 GABRG1Q8N1C3 465 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 LINC01555Q8NAE3 123 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 OR4C5Q8NGB2 326 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 OR51G1Q8NGK1 321 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 NUBPLQ8TB37 319 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 PEX13Q92968 403 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 EEF1AKMT3Q96AZ1 226 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ASB9Q96DX5 294 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TAAR1Q96RJ0 339 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ECSITQ9BQ95 431 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ASB8Q9H765 288 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 DMAP1Q9NPF5 467 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 TUBG2Q9NRH3 451 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 C20orf96Q9NUD7 363 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 HRASLS2Q9NWW9 162 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF226Q9NYT6 803 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 AHSPQ9NZD4 102 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 PRO0461Q9UI25 63 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF223Q9UK11 482 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 SLC17A4Q9Y2C5 497 aa2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CAB39Q9Y376 341 aaPredicted RBP2.04□□□□□ -2.08
SCFD1-213ENST00000554776 CDC42BPBQ9Y5S2 1711 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CAMTA1Q9Y6Y1 1673 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 UBN2Q6ZU65 1347 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CENPJQ9HC77 1338 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 TRIM49D1C9J1S8 452 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 TMX2-CTNND1H3BSU7 103 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 PES1O00541 588 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 SLC9A3R1O14745 358 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 AKR7A2O43488 359 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 AIREO43918 545 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CCNB2O95067 398 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 FABP3P05413 133 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 PNMA6AP0CW24 399 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 PRPS2P11908 318 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 STOMP27105 288 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 HOXA9P31269 272 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 OTX1P32242 354 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CDKN2BP42772 138 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 ADARB1P78563 741 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 HMGCS1Q01581 520 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 MADCAM1Q13477 382 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 IL18Q14116 193 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 RCAN2Q14206 197 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 ITIH4Q14624 930 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 MPPED2Q15777 294 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 COA6Q5JTJ3 125 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 STRADAQ7RTN6 431 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 C6orf120Q7Z4R8 191 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 STPG2Q8N412 459 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 RNF175Q8N4F7 328 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 PQLC3Q8N755 202 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CEP170P1Q96L14 293 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 COL21A1Q96P44 957 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 TSSK3Q96PN8 268 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 GSDMAQ96QA5 445 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 SH3GL3Q99963 347 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 MTG1Q9BT17 334 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 MRPL37Q9BZE1 423 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 SLC7A5P2Q9GIP4 190 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 CRLF2Q9HC73 371 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 TMEM9BQ9NQ34 198 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 RPRD1BQ9NQG5 326 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 LYARQ9NX58 379 aaKnown RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 STOX2Q9P2F5 926 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 ZNF629Q9UEG4 869 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-213ENST00000554776 LGALS13Q9UHV8 139 aa2.03□□□□□ -2.08
SCFD1-213ENST00000554776 WDR62O43379 1518 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ARHGAP21Q5T5U3 1957 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ZNFX1Q9P2E3 1918 aaKnown RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 IGKV6D-21A0A0A0MT36 114 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 TRBV9A0A0B4J1U6 114 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 A0A0B4J2A0 478 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 IGHV3-64DA0A0J9YX35 117 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 PINLYPA6NC86 204 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 GOLGA8TH3BQL2 631 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 FKBP6O75344 327 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CLDN11O75508 207 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CD160O95971 181 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 EIF4EP06730 217 aaKnown RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 STAG3L3P0CL85 134 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 PSG2P11465 335 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 NR2C1P13056 603 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CCNB1P14635 433 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 GGT1P19440 569 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 HMOX2P30519 316 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 OR1E1P30953 314 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 FOXN2P32314 431 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 GPX4P36969 197 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CEACAM3P40198 252 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 CEACAM6P40199 344 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 STXBP1P61764 594 aaKnown RBP2.02□□□□□ -2.09
SCFD1-213ENST00000554776 MAB21L1Q13394 359 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF726P1Q15940 193 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 PSMD5Q16401 504 aa2.02□□□□□ -2.09
SCFD1-213ENST00000554776 POU2AF1Q16633 256 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms