RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 LSM11P83369 360 aaKnown RBP eCLIP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 IL5RAQ01344 420 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 APOFQ13790 326 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 GGTLC2Q14390 218 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 MAD2L1BPQ15013 274 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 PTGES3Q15185 160 aaKnown RBP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 C1QTNF12Q5T7M4 302 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 CYB5R2Q6BCY4 276 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 NIPAL3Q6P499 406 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM154Q6P9G4 183 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 KLHL24Q6TFL4 600 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 C5orf46Q6UWT4 87 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 NRMQ8IXM6 262 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 KDM8Q8N371 416 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM255BQ8WV15 326 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM158Q8WZ71 300 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 MSI2Q96DH6 328 aaKnown RBP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF837Q96EG3 531 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 SOX7Q9BT81 388 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 KATNB1Q9BVA0 655 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 PRRG3Q9BZD7 231 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 CA10Q9NS85 328 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 PLCXD1Q9NUJ7 323 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 IL20Q9NYY1 176 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 B3GAT1Q9P2W7 334 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 PCDHGB5Q9Y5G0 923 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 PMF1-BGLAPU3KQ54 211 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 LMX1BO60663 402 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 SMIM18P0DKX4 95 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 SLC9A3P48764 834 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 PDLIM4P50479 330 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 SNRPGP62308 76 aaKnown RBP9.16□□□□□ -0.94
SHMT2-215ENST00000554656 CDK5Q00535 292 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 ROR2Q01974 943 aaKnown RBP9.16□□□□□ -0.94
SHMT2-215ENST00000554656 NAAAQ02083 359 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 HGFACQ04756 655 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 ANKDD1AQ495B1 522 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 SLC25A30Q5SVS4 291 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 C12orf73Q69YU5 71 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM225Q6GV28 225 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 WDR88Q6ZMY6 472 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 WDFY1Q8IWB7 410 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 ENTHD1Q8IYW4 607 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TSPAN14Q8NG11 270 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 RHOXF1Q8NHV9 184 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 FAM81AQ8TBF8 368 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TEX47Q8TBZ9 253 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 STK35Q8TDR2 534 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 LIPHQ8WWY8 451 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 KTI12Q96EK9 354 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-215ENST00000554656 FOXN4Q96NZ1 517 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TAPBPLQ9BX59 468 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TEX12Q9BXU0 123 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 BEX2Q9BXY8 128 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 LINC00470Q9BZP3 86 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 PLK3Q9H4B4 646 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 CCNB1IP1Q9NPC3 277 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 OBP2BQ9NPH6 170 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 IMPAD1Q9NX62 359 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 RASD1Q9Y272 281 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 TPRKBQ9Y3C4 175 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 CDH10Q9Y6N8 788 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 ANK2Q01484 3957 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 NBEAL1Q6ZS30 2694 aa9.16□□□□□ -0.94
SHMT2-215ENST00000554656 IGKV1D-42A0A075B6H8 117 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 UNC119BA6NIH7 251 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 H3BN98 237 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SLC1A7O00341 560 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 KRT33AO76009 404 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 AHSA1O95433 338 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 IGKV3-15P01624 115 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 OR4A8P0C604 315 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 IFI30P13284 250 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 GABRB1P18505 474 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 CRHBPP24387 322 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SERPINF1P36955 418 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 RPS5P46782 204 aaKnown RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 GIPRP48546 466 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 GZMKP49863 264 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 CLDN17P56750 224 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SNRPD2P62316 118 aaKnown RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 ARF1P84077 181 aaKnown RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 EFNB3Q15768 340 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SLC27A4Q6P1M0 643 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 ANKRD16Q6P6B7 361 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 VHLLQ6RSH7 139 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF620Q6ZNG0 422 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SLC46A3Q7Z3Q1 461 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 ABHD12BQ7Z5M8 362 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 ZCCHC24Q8N2G6 241 aaKnown RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 MFSD8Q8NHS3 518 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SLC25A36Q96CQ1 311 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 BPIFA2Q96DR5 249 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 FAM46AQ96IP4 442 aaKnown RBP9.15□□□□□ -0.94
SHMT2-215ENST00000554656 GPA33Q99795 319 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 PIMREGQ9BSJ6 248 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms