RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 C12orf57Q99622 126 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF160Q9HCG1 818 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ST6GALNAC2Q9UJ37 374 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 FBXO4Q9UKT5 387 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PPIEQ9UNP9 301 aaKnown RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 HS3ST3B1Q9Y662 390 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 BOD1L1Q8NFC6 3051 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 TRBV2A0A0J9YWF9 115 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 C7orf66A4D0T2 115 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 TOXO94900 526 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR6A2O95222 327 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR2T7P0C7T2 308 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 GDI2P50395 445 aaKnown RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 BTG1P62324 171 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 C17orf67Q0P5P2 114 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ACSM3Q53FZ2 586 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 MZT2AQ6P582 158 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 IZUMO1Q8IYV9 350 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR5L2Q8NGL0 311 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR2T27Q8NH04 317 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 SLC39A7Q92504 469 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR14A2Q96R54 314 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PCDHB16Q9NRJ7 776 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 C19orf25Q9UFG5 118 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PISDQ9UG56 409 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 RASD1Q9Y272 281 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 RPH3AQ9Y2J0 694 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 FAM186AA6NE01 2351 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 A8MXK9 166 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 EFNA2O43921 213 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 F10P00742 488 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 RPL35P42766 123 aaKnown RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 NANOS3P60323 173 aaKnown RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 ZP1P60852 638 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 POU4F2Q12837 409 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 ZNF169Q14929 603 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 OVCH2Q7RTZ1 564 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 LIPHQ8WWY8 451 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 ADAD1Q96M93 576 aaKnown RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 AMELYQ99218 206 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 ESRP2Q9H6T0 727 aaKnown RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 DLL4Q9NR61 685 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 INPP5EQ9NRR6 644 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 MRPL15Q9P015 296 aaKnown RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 IKZF2Q9UKS7 526 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 C9J4A7 227 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 XKRYO14609 159 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 PLPP2O43688 288 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 NPIPB7O75200 414 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 LPLP06858 475 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 OTX2P32243 289 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 SIRPAP78324 504 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 MC2RQ01718 297 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 DMKNQ6E0U4 476 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 EXD3Q8N9H8 876 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 POMGNT2Q8NAT1 580 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 THEM6Q8WUY1 208 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 THAP4Q8WY91 577 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 NXPE2Q96DL1 559 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 JSRP1Q96MG2 331 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 SLC26A1Q9H2B4 701 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-212ENST00000554467 BRD7Q9NPI1 651 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 NUDT15Q9NV35 164 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 HPF1Q9NWY4 346 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 MED29Q9NX70 200 aa10.5□□□□□ -0.73
SHMT2-212ENST00000554467 A0A1W2PNR3 127 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SLC16A7O60669 478 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 RAD1O60671 282 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 MPZL1O95297 269 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 PLATP00750 562 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 ANXA3P12429 323 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 RAB3AP20336 220 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 STOMP27105 288 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 LCN1P31025 176 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SFTPDP35247 375 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 PTGDSP41222 190 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 FMODQ06828 376 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 SLC25A35Q3KQZ1 300 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 BEST4Q8NFU0 473 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 MED18Q9BUE0 208 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 EMC6Q9BV81 110 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 LOXL2Q9Y4K0 774 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 PCNX2A6NKB5 2137 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 IGHV1-45A0A0A0MS14 117 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 ANKUB1A6NFN9 424 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 ACOD1A6NK06 481 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 STK17BO94768 372 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 CD3GP09693 182 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 COX6A1P12074 109 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 KLK2P20151 261 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 HSF2Q03933 536 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 GGTLC2Q14390 218 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 OR8K3Q8NH51 312 aa10.49□□□□□ -0.73
SHMT2-212ENST00000554467 UBL7Q96S82 380 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-212ENST00000554467 CCNL2Q96S94 520 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-212ENST00000554467 CMKLR1Q99788 373 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms