RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PELI3Q8N2H9 469 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 Q8N402 240 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PGBD5Q8N414 524 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 D2HGDHQ8N465 521 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR8J3Q8NGG0 315 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CCL4L1Q8NHW4 92 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GRPEL2Q8TAA5 225 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PIGXQ8TBF5 258 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC2A12Q8TD20 617 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MAGEE2Q8TD90 523 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC37A2Q8TED4 501 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TFGQ92734 400 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM136AQ96C01 138 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 R3HDM4Q96D70 268 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 L3HYPDHQ96EM0 354 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SENP5Q96HI0 755 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RNF170Q96K19 258 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM56Q96MV1 263 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MCEEQ96PE7 176 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR14A2Q96R54 314 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CPNE1Q99829 537 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 G6PC3Q9BUM1 346 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ALG8Q9BVK2 526 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TMED9Q9BVK6 235 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 C1QTNF5Q9BXJ0 243 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ACTRT3Q9BYD9 372 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SEMA6AQ9H2E6 1030 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FN3KQ9H479 309 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CARS2Q9HA77 564 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 BARX1Q9HBU1 254 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NLKQ9UBE8 527 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SMPXQ9UHP9 88 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SERTAD3Q9UJW9 196 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NDRG4Q9ULP0 352 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PSG11Q9UQ72 335 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM56-RWDD3S4R434 201 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FREM2Q5SZK8 3169 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 A6NIZ1 184 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PPIAL4DF5H284 164 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 J3KR12 359 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EEF2KO00418 725 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EMC8O43402 210 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SRPX2O60687 465 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SLC19A2O60779 497 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TOX4O94842 621 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CLDN1O95832 211 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NPSP0C0P6 89 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 AMD1P17707 334 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 FPR3P25089 353 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SDHAP31040 664 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 FMO3P31513 532 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 CEACAM8P31997 349 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NPBWR2P48146 333 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 XKP51811 444 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MVDP53602 400 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 AQP5P55064 265 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 AQP4P55087 323 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MLLT10P55197 1068 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TPI1P60174 286 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ZP1P60852 638 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RANP62826 216 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 GAGE1Q13065 139 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SELENBP1Q13228 472 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 KRT81Q14533 505 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 RAB39AQ14964 217 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 IGFBP7Q16270 282 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SLC22A6Q4U2R8 563 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 FFAR4Q5NUL3 377 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 LY6G6FQ5SQ64 297 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TSTD2Q5T7W7 516 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 B3GNTL1Q67FW5 361 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 LRRC8EQ6NSJ5 796 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 DCUN1D2Q6PH85 259 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SPNS3Q6ZMD2 512 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF572Q7Z3I7 529 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SNX29P2Q8IUI4 249 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MRPL41Q8IXM3 137 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 MUC20Q8N307 709 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 PRSS35Q8N3Z0 413 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EIF4E3Q8N5X7 224 aaKnown RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 IL22RA1Q8N6P7 574 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NPWQ8N729 165 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 NANOGP1Q8N7R0 232 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SEMA6DQ8NFY4 1073 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TSPAN14Q8NG11 270 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR52L2PQ8NGH6 319 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR52H1Q8NGJ2 320 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR51G2Q8NGK0 314 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR10S1Q8NGN2 331 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR13D1Q8NGV5 346 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 OR4Q3Q8NH05 313 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM171Q8WVE6 324 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ART4Q93070 314 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 SLCO4A1Q96BD0 722 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 APH1AQ96BI3 265 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF486Q96H40 463 aaPredicted RBP2.42□□□□□ -2.02
PRPF39-206ENST00000554429 TBX5Q99593 518 aa2.42□□□□□ -2.02
PRPF39-206ENST00000554429 EGFL8Q99944 293 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms