RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 VLDLRP98155 873 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 RRM2BQ7LG56 351 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 TSEN54Q7Z6J9 526 aaKnown RBP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 OAFQ86UD1 273 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 SLC22A24Q8N4F4 322 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF555Q8NEP9 628 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 SLC7A13Q8TCU3 470 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 MCHR2Q969V1 340 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 NOX3Q9HBY0 568 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 KRCC1Q9NPI7 259 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 VNN3Q9NY84 501 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 TRAV27A0A087WT01 109 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF14P17017 642 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 SERPINF1P36955 418 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 GPR4P46093 362 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 GIPRP48546 466 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 RPS6KA3P51812 740 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 RPL27P61353 136 aaKnown RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 RAB1AP62820 205 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 TOP3AQ13472 1001 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 IL18R1Q13478 541 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 EFNB3Q15768 340 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 DNM1P46Q6ZS02 220 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 SYT14Q8NB59 555 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 OR13C2Q8NGS9 318 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 NMD3Q96D46 503 aaKnown RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 DHRS1Q96LJ7 313 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 MBOAT4Q96T53 435 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 ALG12Q9BV10 488 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 REEP1Q9H902 201 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 GDF2Q9UK05 429 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 FBXO9Q9UK97 447 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-211ENST00000554310 ORC6Q9Y5N6 252 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
SHMT2-211ENST00000554310 A0A087WXM4 84 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 A6NIZ1 184 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 B9A039 149 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SLC16A6O15403 523 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 NDUFS7O75251 213 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ACVR1BP36896 505 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 LIMS1P48059 325 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ALDH3B2P48448 385 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 NUDT6P53370 316 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SMIM11AP58511 58 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 RAP1BP61224 184 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 RAP1AP62834 184 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 HGFACQ04756 655 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 PIGFQ07326 219 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 CD47Q08722 323 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SNTB2Q13425 540 aaKnown RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 FHL1Q13642 323 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 RAB35Q15286 201 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ADIPOQQ15848 244 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SWI5Q1ZZU3 235 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ZIK1Q3SY52 487 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SLC36A2Q495M3 483 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 PODNL1Q6PEZ8 512 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF786Q8N393 782 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 OR4K5Q8NGD3 323 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 OR51A7Q8NH64 312 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 HDAC2Q92769 488 aaKnown RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF75AQ96N20 296 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 C1orf198Q9H425 327 aa11.31□□□□□ -0.6
SHMT2-211ENST00000554310 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 SAMHD1Q9Y3Z3 626 aaKnown RBP11.31□□□□□ -0.6
SHMT2-211ENST00000554310 TRBV4-1A0A0J9YWV2 114 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 CDC42EP2O14613 210 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SMAD7O15105 426 aaKnown RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SSX4O60224 188 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 SLC2A10O95528 541 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 HEXAP06865 529 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 OR4A8P0C604 315 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 ATP6V1B1P15313 513 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 NPR2P20594 1047 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 RPL4P36578 427 aaKnown RBP11.3□□□□□ -0.6
SHMT2-211ENST00000554310 EFNA4P52798 201 aa11.3□□□□□ -0.6
SHMT2-211ENST00000554310 CTXN1P60606 82 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms