RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 LIPNQ5VXI9 398 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 SAXO2Q658L1 398 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 PAQR6Q6TCH4 344 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 USP43Q70EL4 1123 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 RNF130Q86XS8 419 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CMIPQ8IY22 773 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CADM2Q8N3J6 435 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 LINC00471Q8N535 108 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 POMGNT2Q8NAT1 580 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 OR9K2Q8NGE7 335 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 DYNC2LI1Q8TCX1 351 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CNOT9Q92600 299 aaKnown RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 ZG16BQ96DA0 208 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 MSI2Q96DH6 328 aaKnown RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 NEURL3Q96EH8 262 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 TPD52L3Q96J77 140 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 FOXN4Q96NZ1 517 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ALKBH3Q96Q83 286 aaPredicted RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 SLC38A2Q96QD8 506 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 TAPBPLQ9BX59 468 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CACYBPQ9HB71 228 aaKnown RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 MYOZ1Q9NP98 299 aaPredicted RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 AKIP1Q9NQ31 210 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 PSORS1C1Q9UIG5 152 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 PAIP2BQ9ULR5 123 aaKnown RBP7.7□□□□□ -1.18
TDP1-208ENST00000553989 PLCE1Q9P212 2302 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 CUBNO60494 3623 aa7.7□□□□□ -1.18
TDP1-208ENST00000553989 ANK3Q12955 4377 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 IGHV4-61A0A0C4DH41 118 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 ZC3H12DA2A288 527 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 hCG_2039718K7EN88 272 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 HMGN4O00479 90 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 XPNPEP2O43895 674 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 LGI1O95970 557 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 MT-ND2P03891 347 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CDK1P06493 297 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 GUSBP08236 651 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 NR2F1P10589 423 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CD36P16671 472 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 RHCEP18577 417 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 PSMB9P28065 219 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 GTF2E2P29084 291 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 FMO3P31513 532 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 THBS2P35442 1172 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 SRP14P37108 136 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 OPRL1P41146 370 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 SLC1A3P43003 542 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CRATP43155 626 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 MAP2K6P52564 334 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CDC42P60953 191 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 COPZ1P61923 177 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 H3F3AP84243 136 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 ZNF45Q02386 682 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 AQP6Q13520 282 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 TBCEQ15813 527 aaPredicted RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 SYPL1Q16563 259 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 ZNF181Q2M3W8 571 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 TBRG1Q3YBR2 411 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 MRPL2Q5T653 305 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 TMEM225Q6GV28 225 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 NIPAL3Q6P499 406 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 GDPGP1Q6ZNW5 385 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 IGFN1Q86VF2 1251 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 TMEM99Q8N816 258 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CNIH3Q8TBE1 160 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 RASSF5Q8WWW0 418 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 GEMIN6Q8WXD5 167 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 TMEM45BQ96B21 275 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 ZNF385AQ96PM9 386 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 TRNT1Q96Q11 434 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 COPS4Q9BT78 406 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 BPESC1Q9GZL8 116 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 RAB1BQ9H0U4 201 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 SP140LQ9H930 580 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 OBP2BQ9NPH6 170 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CA10Q9NS85 328 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 FKBP14Q9NWM8 211 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CLN6Q9NWW5 311 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 VNN3Q9NY84 501 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 CNOT2Q9NZN8 540 aaKnown RBP7.69□□□□□ -1.18
TDP1-208ENST00000553989 ANGPT4Q9Y264 503 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 PEX16Q9Y5Y5 336 aa7.69□□□□□ -1.18
TDP1-208ENST00000553989 A0A096LPE4 126 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 IGHV1-18A0A0C4DH31 117 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 A0A1W2PPZ6 126 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 LRP5LA4QPB2 252 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 AGAP5A6NIR3 686 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 LIPT2A6NK58 231 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 AQP7P3A6NL99 342 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 VSTM5A8MXK1 200 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 EFCAB9A8MZ26 197 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 VWC2LB2RUY7 222 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 B9A039 149 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 CCNB2O95067 398 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 DBIP07108 87 aaKnown RBP7.68□□□□□ -1.18
TDP1-208ENST00000553989 CHRM4P08173 479 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 OR4A8P0C604 315 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 S100A5P33763 92 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 CDK6Q00534 326 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PLAURQ03405 335 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms