RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 LRP12Q9Y561 859 aa6.24□□□□□ -1.41
LINC-ROR-201ENST00000553704 ADAMTS20P59510 1910 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ASXL3Q9C0F0 2248 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CFAP54Q96N23 3096 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 IGKV3D-11A0A0A0MRZ8 115 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TRAV14DV4A0A0A6YYC5 116 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TCRBV16S1A1N1A0A5B0 115 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 PRSS37A4D1T9 235 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 BLACEA4D250 179 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 F5H5P2 479 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LGALS8O00214 317 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 AKAIN1P0CW23 69 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 HLA-DOBP13765 273 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 S100A11P31949 105 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 NR0B1P51843 470 aaKnown RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ADAM8P78325 824 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SORDQ00796 357 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 FMODQ06828 376 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SERTAD2Q14140 314 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 NR0B2Q15466 257 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 COL13A1Q5TAT6 717 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ARHGAP40Q5TG30 622 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TMEM225Q6GV28 225 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 RGS7BPQ6MZT1 257 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 C17orf107Q6ZR85 190 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 GPX8Q8TED1 209 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 METTL21AQ8WXB1 218 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SLC46A1Q96NT5 459 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TINAGL1Q9GZM7 467 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LAT2Q9GZY6 243 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ARL6Q9H0F7 186 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ATG5Q9H1Y0 275 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 POFUT1Q9H488 388 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ZNF230Q9UIE0 474 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 FBXO4Q9UKT5 387 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SEC16AO15027 2179 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TRAV36DV7A0A075B6V5 113 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LOC100289279A0A1B0GTE1 492 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 UBE2QL1A1L167 161 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 WIPF3A6NGB9 483 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 H0YIG0 161 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 H3BMH7 237 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 XKRYO14609 159 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ADAM10O14672 748 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SIGLEC5O15389 551 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CDC40O60508 579 aaKnown RBP eCLIP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SDC3O75056 442 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 RP2O75695 350 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 B3GALNT1O75752 331 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ZNF432O94892 652 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 HOXD4P09016 255 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LIPCP11150 499 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 GABRA1P14867 456 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ZP3P21754 424 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CXCR1P25024 350 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 PRSS3P35030 304 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 RORAP35398 523 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 FAUP35544 74 aaKnown RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 FASLGP48023 281 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CCR5P51681 352 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SIGLEC14Q08ET2 396 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 EIF2B1Q14232 305 aaKnown RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 VWA2Q5GFL6 755 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TEX30Q5JUR7 227 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LY6G6FQ5SQ64 297 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 STEAP1BQ6NZ63 245 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 FDX2Q6P4F2 183 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TSSK4Q6SA08 328 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 C16orf47Q6ZP98 133 aaPredicted RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ZNF679Q8IYX0 411 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 GABRG1Q8N1C3 465 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SPERTQ8NA61 448 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 OR1J2Q8NGS2 313 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 LMX1AQ8TE12 382 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 RNF128Q8TEB7 428 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TNFAIP8L1Q8WVP5 186 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ASB5Q8WWX0 329 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 KLHDC7BQ96G42 594 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CYYR1Q96J86 154 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 SLC38A3Q99624 504 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 ABHD6Q9BV23 337 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 EXO5Q9H790 373 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TMEM138Q9NPI0 162 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 CUTCQ9NTM9 273 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 MRPS18BQ9Y676 258 aaKnown RBP6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 TMEM14AQ9Y6G1 99 aa6.23□□□□□ -1.41
LINC-ROR-201ENST00000553704 WDFY3Q8IZQ1 3526 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 A0A1W2PPC1 479 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 A0A1W2PPC4 97 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 SLC22A23A1A5C7 686 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 FITM1A5D6W6 292 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 TUBAL3A6NHL2 446 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 TMEM150CB9EJG8 249 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 TSPAN2O60636 221 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 NPIPB7O75200 414 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 SRSF10O75494 262 aaKnown RBP6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 RLN2P04090 185 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 ITGB2P05107 769 aa6.22□□□□□ -1.41
LINC-ROR-201ENST00000553704 PPP3CBP16298 524 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms