RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 FOXN4Q96NZ1 517 aa12.07□□□□□ -0.48
TUBB3-202ENST00000553656 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
TUBB3-202ENST00000553656 USE1Q9NZ43 259 aa12.07□□□□□ -0.48
TUBB3-202ENST00000553656 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-202ENST00000553656 POU2F3Q9UKI9 436 aa12.07□□□□□ -0.48
TUBB3-202ENST00000553656 IGLV1-36A0A0B4J1U3 117 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF503-AS2A6NEH8 195 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-202ENST00000553656 SURF4O15260 269 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 PTHP01270 115 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 IGKV3-15P01624 115 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 CRYAAP02489 173 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 ALPLP05186 524 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 CST2P09228 141 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 PATE4P0C8F1 98 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-202ENST00000553656 TRIP10Q15642 601 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 SNAPC1Q16533 368 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-202ENST00000553656 ZBTB46Q86UZ6 589 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 CDC20BQ86Y33 519 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 IL17RDQ8NFM7 739 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 OR9Q1Q8NGQ5 310 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 WACQ9BTA9 647 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 GABARAPL3Q9BY60 117 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 C1orf198Q9H425 327 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 EMC7Q9NPA0 242 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 B3GNT2Q9NY97 397 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 TVP23BQ9NYZ1 205 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
TUBB3-202ENST00000553656 EDARQ9UNE0 448 aa12.06□□□□□ -0.48
TUBB3-202ENST00000553656 ZAR1LA6NP61 321 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 FAM171A2A8MVW0 826 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 DCTN6O00399 190 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 CECR9P0C854 216 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF823P16415 610 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 PYCR1P32322 319 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 BLVRAP53004 296 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 LSM6P62312 80 aaKnown RBP12.05□□□□□ -0.48
TUBB3-202ENST00000553656 SCRN3Q0VDG4 424 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 AQP6Q13520 282 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
TUBB3-202ENST00000553656 SLX4IPQ5VYV7 408 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 PLBD1Q6P4A8 553 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 SYT9Q86SS6 491 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 ALDH16A1Q8IZ83 802 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 OR6K6Q8NGW6 343 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 C11orf40Q8WZ69 217 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF416Q9BWM5 594 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 CDADC1Q9BWV3 514 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 DCLRE1BQ9H816 532 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 UBTD1Q9HAC8 227 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 NOX3Q9HBY0 568 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 C8orf4Q9NR00 106 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF224Q9NZL3 707 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 TIMM10BQ9Y5J6 103 aa12.05□□□□□ -0.48
TUBB3-202ENST00000553656 FAM183AA6NL82 134 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 MPZL1O95297 269 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 SERPINA5P05154 406 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 GYPBP06028 91 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 CELA3BP08861 270 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 GAAP10253 952 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF32P17041 273 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 SPI1P17947 270 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 LOXP28300 417 aaPredicted RBP12.04□□□□□ -0.48
TUBB3-202ENST00000553656 FMO3P31513 532 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 APLNRP35414 380 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 CDH11P55287 796 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 NAAAQ02083 359 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 TEKQ02763 1124 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 ENDOGQ14249 297 aaKnown RBP12.04□□□□□ -0.48
TUBB3-202ENST00000553656 RAB39AQ14964 217 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 UGT2A3Q6UWM9 527 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 SLC26A10Q8NG04 563 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 OR51L1Q8NGJ5 315 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 OR1J2Q8NGS2 313 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 AKAP1Q92667 903 aaKnown RBP eCLIP12.04□□□□□ -0.48
TUBB3-202ENST00000553656 FBXO17Q96EF6 278 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 DDOQ99489 341 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 TMEM204Q9BSN7 226 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 OR51V1Q9H2C8 321 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 MOKQ9UQ07 419 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 ATP23Q9Y6H3 246 aa12.04□□□□□ -0.48
TUBB3-202ENST00000553656 ASH1LQ9NR48 2969 aaKnown RBP12.04□□□□□ -0.48
TUBB3-202ENST00000553656 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 GPANK1O95872 356 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 PLAUP00749 431 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 MMP7P09237 267 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-202ENST00000553656 CLUP10909 449 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-202ENST00000553656 EPHA2P29317 976 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 CDC42P60953 191 aa12.03□□□□□ -0.48
TUBB3-202ENST00000553656 RPS7P62081 194 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms