RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 BTNL2Q9UIR0 455 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 IFT52Q9Y366 437 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 LOC100509620A0A075B734 347 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 A0A1B0GWA3 101 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 LRRN3E7EW58 273 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 C11orf98E9PRG8 122 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 K7EIL1 84 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 COPEO14579 308 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 SURF4O15260 269 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 ENSAO43768 121 aaKnown RBP11.45□□□□□ -0.58
PRPF39-204ENST00000553605 TOX4O94842 621 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 BCHEP06276 602 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 ADORA3P0DMS8 318 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 ECHS1P30084 290 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 TGFBR2P37173 567 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 GDI2P50395 445 aaKnown RBP11.45□□□□□ -0.58
PRPF39-204ENST00000553605 MMP16P51512 607 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 PSG7Q13046 419 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 DEFB121Q5J5C9 76 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 RPS26P11Q5JNZ5 115 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-204ENST00000553605 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 SLC35D2Q76EJ3 337 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 C10orf53Q8N6V4 93 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 LSMEM1Q8N8F7 131 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 DNAJA4Q8WW22 397 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-204ENST00000553605 SLC25A44Q96H78 314 aaPredicted RBP11.45□□□□□ -0.58
PRPF39-204ENST00000553605 TBX15Q96SF7 602 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 KCNN2Q9H2S1 579 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 TOR3AQ9H497 397 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 FBLN5Q9UBX5 448 aa11.45□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF879B4DU55 563 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 IFNL4K9M1U5 179 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 RIPK2O43353 540 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 MGRN1O60291 552 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 PPP1R3DO95685 299 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 MMP9P14780 707 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 S100A3P33764 101 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 CDKN2CP42773 168 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF84P51523 738 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 COL10A1Q03692 680 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 RUNDC3AQ59EK9 446 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 WDR25Q64LD2 544 aaPredicted RBP11.44□□□□□ -0.58
PRPF39-204ENST00000553605 Q6ZR03 302 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 SCCPDHQ8NBX0 429 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 OR4S1Q8NGB4 309 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 VANGL1Q8TAA9 524 aaPredicted RBP11.44□□□□□ -0.58
PRPF39-204ENST00000553605 SLC38A5Q8WUX1 472 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 CFHR4Q92496 578 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 MAGEB18Q96M61 343 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 MAN2C1Q9NTJ4 1040 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 USH1CQ9Y6N9 552 aa11.44□□□□□ -0.58
PRPF39-204ENST00000553605 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 A0A0G2JPF8 293 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 HNRNPCL2B2RXH8 293 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 HNRNPCL3B7ZW38 293 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 C22orf46C9J442 243 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 PHYHO14832 338 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 HNRNPCL1O60812 293 aaKnown RBP11.43□□□□□ -0.58
PRPF39-204ENST00000553605 OR6A2O95222 327 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 KRT75O95678 551 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 CYB5R3P00387 301 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-204ENST00000553605 LIPFP07098 398 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 PGA4P0DJD7 388 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 PGA3P0DJD8 388 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 HNRNPCL4P0DMR1 293 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF32P17041 273 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 HTR2AP28223 471 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ALDH3A1P30838 453 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 GABRA5P31644 462 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ARHGDIAP52565 204 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 MELKQ14680 651 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 DPY19L1Q2PZI1 675 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF404Q494X3 552 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ULK3Q6PHR2 472 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 TRMT10CQ7L0Y3 403 aaKnown RBP11.43□□□□□ -0.58
PRPF39-204ENST00000553605 OR5J2Q8NH18 312 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 AKR7LQ8NHP1 331 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ZNF420Q8TAQ5 688 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-204ENST00000553605 LHX4Q969G2 390 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 MCHR2Q969V1 340 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 WDFY2Q96P53 400 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 ELOVL3Q9HB03 270 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 VPREB3Q9UKI3 123 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 FOXJ3Q9UPW0 622 aa11.43□□□□□ -0.58
PRPF39-204ENST00000553605 BTBD17A6NE02 478 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 ANKRD61A6NGH8 418 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 ICMTO60725 284 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 ETFAP13804 333 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 CRATP43155 626 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 CLNS1AP54105 237 aaKnown RBP11.42□□□□□ -0.58
PRPF39-204ENST00000553605 CD69Q07108 199 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 TAF11Q15544 211 aa11.42□□□□□ -0.58
PRPF39-204ENST00000553605 FAM91A1Q658Y4 838 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms