RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SLCO1C1Q9NYB5 712 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 GRHPRQ9UBQ7 328 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 MAGEL2Q9UJ55 1249 aa11.12□□□□□ -0.63
ACTN1-207ENST00000553290 ANK3Q12955 4377 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 IGLV3-9A0A075B6K5 115 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 A0A1W2PPL8 197 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 LMX1BO60663 402 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 PTP4A3O75365 173 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 DCTN3O75935 186 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 NDUFB2O95178 105 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 TACSTD2P09758 323 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 STOMP27105 288 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 LAP3P28838 519 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 CHN2P52757 468 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 SMIM11AP58511 58 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 PSG4Q00888 419 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 RIN1Q13671 783 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 MAD2L1BPQ15013 274 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 MOGQ16653 247 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 NKPD1Q17RQ9 610 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 FGD3Q5JSP0 725 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 SAMD4BQ5PRF9 694 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 UNQ6126/PRO20091Q6UXV3 157 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 PIGWQ7Z7B1 504 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 SYT9Q86SS6 491 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 C1orf174Q8IYL3 243 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 CLDN22Q8N7P3 220 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 CPEB3Q8NE35 698 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 SNX33Q8WV41 574 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 HPS1Q92902 700 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 PYURFQ96I23 114 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 POM121L2Q96KW2 1035 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 WACQ9BTA9 647 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 NDE1Q9NXR1 346 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 TAAR3PQ9P1P4 343 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 MYEF2Q9P2K5 600 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 EIF3KQ9UBQ5 218 aaKnown RBP11.11□□□□□ -0.63
ACTN1-207ENST00000553290 LPAR3Q9UBY5 353 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 TAGLN3Q9UI15 199 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 KCNS2Q9ULS6 477 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 AURKCQ9UQB9 309 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 SIGLEC7Q9Y286 467 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 TIMM10BQ9Y5J6 103 aa11.11□□□□□ -0.63
ACTN1-207ENST00000553290 MALRD1Q5VYJ5 2156 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 LOC100289279A0A1B0GTE1 492 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 CLPTM1O96005 669 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 NAT2P11245 290 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 TCN1P20061 433 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 MSR1P21757 451 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ACHEP22303 614 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 CCNOP22674 350 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 OMPP47874 163 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 GDI2P50395 445 aaKnown RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 GYS2P54840 703 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 MRPS11P82912 194 aaKnown RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 SPATS1Q496A3 300 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 MESTQ5EB52 335 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 UGT2A3Q6UWM9 527 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 C16orf89Q6UX73 402 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 FAM86B1Q8N7N1 296 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 OR1J1Q8NGS3 322 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 AKR7LQ8NHP1 331 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 RDH5Q92781 318 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 MSI2Q96DH6 328 aaKnown RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 DHRS1Q96LJ7 313 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 Q96M85 177 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ZNF570Q96NI8 536 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 GPX7Q96SL4 187 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 CDRT15Q96T59 188 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 BEX2Q9BXY8 128 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 OR2H1Q9GZK4 316 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 CHODLQ9H9P2 273 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 HINT3Q9NQE9 182 aaKnown RBP11.1□□□□□ -0.63
ACTN1-207ENST00000553290 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 ADAM18Q9Y3Q7 739 aa11.1□□□□□ -0.63
ACTN1-207ENST00000553290 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 TRBV4-1A0A0J9YWV2 114 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 PRSS37A4D1T9 235 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 C5orf49A4QMS7 147 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 C12orf71A8MTZ7 269 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 LYNX1G3V0Z9 82 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 H7C1C5 153 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 LILRA1O75019 489 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 DIRAS1O95057 198 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 IGHV3-13P01766 116 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 HPXP02790 462 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 MT-ND5P03915 603 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 FAM157CP0CG43 387 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 LYNX1P0DP58 116 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 SDHAP31040 664 aa11.09□□□□□ -0.63
ACTN1-207ENST00000553290 LIMS1P48059 325 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms