RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ADRB1P08588 477 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 CD63P08962 238 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 HLA-DMAP28067 261 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC6A1P30531 599 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 CLDN12P56749 244 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 MLF1P58340 268 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 DGCR2P98153 550 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 RPS19BP1Q86WX3 136 aaKnown RBP12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 ST6GAL2Q96JF0 529 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 RBP7Q96R05 134 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 ABCG5Q9H222 651 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 PROK2Q9HC23 129 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 SH2D2AQ9NP31 389 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF221Q9UK13 617 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 PADI1Q9ULC6 663 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 GTF2A1LQ9UNN4 478 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 CACNG2Q9Y698 323 aa12.52□□□□□ -0.4
RAB3IP-216ENST00000552199 ANXA2P2A6NMY6 339 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 H3BSH0 61 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 SRSF10O75494 262 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 MAS1P04201 325 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 CD3GP09693 182 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 CCL3P10147 92 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 DDOSTP39656 456 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 KCNJ8Q15842 424 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF239Q16600 458 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 TATDN3Q17R31 274 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM176BQ3YBM2 270 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 ATAD3CQ5T2N8 411 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 ARMC10Q8N2F6 343 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 PAQR8Q8TEZ7 354 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 UPRTQ96BW1 309 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 PISDQ9UG56 409 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 FRYLO94915 3013 aa12.52□□□□□ -0.41
RAB3IP-216ENST00000552199 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 SFTPDP35247 375 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 SRP9P49458 86 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 TBRG1Q3YBR2 411 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 PLA1AQ53H76 456 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 RNASE12Q5GAN4 147 aaKnown RBP12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 STPG1Q5TH74 334 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 SLC22A10Q63ZE4 541 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 C6orf15Q6UXA7 325 aaPredicted RBP12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 KRT74Q7RTS7 529 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 PRSS45Q7RTY3 260 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 TMPRSS12Q86WS5 348 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 LINC00346Q8IVM7 164 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 IZUMO1Q8IYV9 350 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM156Q8N614 296 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 DNAAF1Q8NEP3 725 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 RAB40AQ8WXH6 277 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 POU2F3Q9UKI9 436 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 ETV7Q9Y603 341 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 R4GMQ9 66 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 BDP1A6H8Y1 2624 aa12.51□□□□□ -0.41
RAB3IP-216ENST00000552199 ZNF814B7Z6K7 855 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 MASP2O00187 686 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TRAF3IP2O43734 574 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 ORC5O43913 435 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 LIFP15018 202 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TMEM225Q6GV28 225 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 PPP1R32Q7Z5V6 425 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SYNPRQ8TBG9 265 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 C11orf40Q8WZ69 217 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 CREB3L1Q96BA8 519 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 S100A16Q96FQ6 103 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SLC25A44Q96H78 314 aaPredicted RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 ZPBPQ9BS86 351 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 STRADBQ9C0K7 418 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 HPF1Q9NWY4 346 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 NUFIP1Q9UHK0 495 aaKnown RBP12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 FBXL3Q9UKT7 428 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 ALG5Q9Y673 324 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 LOC102725191A0A1B0GVB3 256 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 SULT2B1O00204 365 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 RAD1O60671 282 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 IGHG1P01857 330 aa12.5□□□□□ -0.41
RAB3IP-216ENST00000552199 PGA4P0DJD7 388 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms