RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 C1orf147Q96MC9 270 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 DCLRE1CQ96SD1 692 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 SEPHS2Q99611 448 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 MRPL13Q9BYD1 178 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 OR2J1Q9GZK6 312 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 PATZ1Q9HBE1 687 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 NPHS2Q9NP85 383 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 VAPAQ9P0L0 249 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 OR5V1Q9UGF6 321 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 EGFL7Q9UHF1 273 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC7A7Q9UM01 511 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 PRKDCP78527 4128 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-210ENST00000551981 TRAPPC13A5PLN9 417 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 GMNCA6NCL1 334 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 TRAPPC2LH3BP13 241 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 NR2C1P13056 603 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ACADSP16219 412 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC6A9P48067 706 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ARHGDIAP52565 204 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF133P52736 654 aaPredicted RBP11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 PPP1CBP62140 327 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC9A3R2Q15599 337 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 NPTX1Q15818 432 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 SGCAQ16586 387 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ESCO2Q56NI9 601 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ARL9Q6T311 187 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 RFPL4BQ6ZWI9 263 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 C11orf65Q8NCR3 313 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ASB10Q8WXI3 467 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF48Q96MX3 618 aaPredicted RBP11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 IKZF5Q9H5V7 419 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 SMURF2Q9HAU4 748 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 TMEM106BQ9NUM4 274 aa11.97□□□□□ -0.49
CHMP1A-210ENST00000551981 LOC100509620A0A075B734 347 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TRBV5-3A0A0A0MS03 114 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 A8MXK9 166 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 POLR3GO15318 223 aaPredicted RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TIMM8AO60220 97 aaPredicted RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TRMUO75648 421 aaKnown RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 LYPD3O95274 346 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 SLC2A10O95528 541 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 F13BP05160 661 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 CDAP32320 146 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 UGT2B15P54855 530 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 PCBP3P57721 371 aaKnown RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 BTG1P62324 171 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TAF11Q15544 211 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 DUSP7Q16829 419 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 CYP51A1Q16850 503 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 MTX3Q5HYI7 312 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 TMEM255AQ5JRV8 349 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 PAGE3Q5JUK9 113 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 LEG1Q6P5S2 330 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 EPGNQ6UW88 154 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 FUNDC1Q8IVP5 155 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 OR52E2Q8NGJ4 325 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 AKR7LQ8NHP1 331 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 VANGL1Q8TAA9 524 aaPredicted RBP11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 ZNF426Q9BUY5 554 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 ELOVL3Q9HB03 270 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 INIPQ9NRY2 104 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 CCDC167Q9P0B6 97 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 KLHL21Q9UJP4 597 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 USH1CQ9Y6N9 552 aa11.96□□□□□ -0.49
CHMP1A-210ENST00000551981 M0QX08 132 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 ICMTO60725 284 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 OPN1SWP03999 348 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 THY1P04216 161 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 CD247P20963 164 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 PCBD1P61457 104 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 ERVK-25P63136 954 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 PSG4Q00888 419 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 CD47Q08722 323 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 CDK5R2Q13319 367 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 OCLNQ16625 522 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 FAM27BQ5VT28 67 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 BTNL3Q6UXE8 466 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 LRRC28Q86X40 367 aaPredicted RBP11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 RBM45Q8IUH3 476 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 MUC20Q8N307 709 aaPredicted RBP11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 PARP8Q8N3A8 854 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 ZNF283Q8N7M2 679 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 GPR32P1Q8NGA4 272 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 TMIGD2Q96BF3 282 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 ZBTB9Q96C00 473 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 SAMD8Q96LT4 415 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 OR2H1Q9GZK4 316 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms