RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 GAREM1Q9H706 876 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 COPZ2Q9P299 210 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 AHSA1O95433 338 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 ALDOBP05062 364 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 RASGEF1BQ0VAM2 473 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 NR0B2Q15466 257 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 SLC18B1Q6NT16 456 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 RHBDD2Q6NTF9 364 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 NDUFAF7Q7L592 441 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 PLEKHA1Q9HB21 404 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 NOX3Q9HBY0 568 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 STMN3Q9NZ72 180 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 ING4Q9UNL4 249 aa12.72□□□□□ -0.37
CALCOCO1-218ENST00000550804 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 LMX1BO60663 402 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 PEX14O75381 377 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 FREM3P0C091 2139 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 RAB40ALP0C0E4 278 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 ANXA3P12429 323 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 LCN1P31025 176 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 SLC25A25Q6KCM7 469 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 LRFN4Q6PJG9 635 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 BPHLQ86WA6 291 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 RNF128Q8TEB7 428 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 RAB40AQ8WXH6 277 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 ZC3H10Q96K80 434 aaKnown RBP12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 CITED4Q96RK1 184 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 CHIAQ9BZP6 476 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 TMEM185BQ9H7F4 350 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 METTL17Q9H7H0 456 aaPredicted RBP12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 LRP12Q9Y561 859 aa12.71□□□□□ -0.37
CALCOCO1-218ENST00000550804 OR6C76A6NM76 312 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 GLSO94925 669 aaPredicted RBP12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 RAF1P04049 648 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 SULT1A3P0DMM9 295 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 SULT1A4P0DMN0 295 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 POU3F4P49335 361 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 CCL7P80098 99 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 PUDPQ08623 228 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 EID2Q8N6I1 236 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 TMEM105Q8N8V8 129 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 ASB5Q8WWX0 329 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 C7orf50Q9BRJ6 194 aaKnown RBP12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 EMC7Q9NPA0 242 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 DLL4Q9NR61 685 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 EMC9Q9Y3B6 208 aa12.71□□□□□ -0.38
CALCOCO1-218ENST00000550804 TRBV11-1A0A0K0K1C0 115 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 TOX3O15405 576 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 CTAG2O75638 210 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 ALX3O95076 343 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 SLC26A5P58743 744 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 TMEM205Q6UW68 189 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 WDR77Q9BQA1 342 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 MRPL39Q9NYK5 338 aaKnown RBP12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 CGGBP1Q9UFW8 167 aaPredicted RBP12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 ADAMTS9Q9P2N4 1935 aa12.7□□□□□ -0.38
CALCOCO1-218ENST00000550804 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 MEIKINA0A087WXM9 373 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 DCDC2BA2VCK2 349 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 G3V3Q6 166 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 XRCC3O43542 346 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 SCRG1O75711 98 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 POU3F1Q03052 451 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 GLO1Q04760 184 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 FOXF1Q12946 379 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 SNTA1Q13424 505 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 LGALSLQ3ZCW2 172 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 OR10K2Q6IF99 312 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 CREB3L2Q70SY1 520 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 DCXRQ7Z4W1 244 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 OR52B4Q8NGK2 314 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 DVL3Q92997 716 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 FAM3DQ96BQ1 224 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 MNTQ99583 582 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 TGIF2Q9GZN2 237 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 ZMAT3Q9HA38 289 aaKnown RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 CA10Q9NS85 328 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 ACOT7O00154 380 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 EIF1AYO14602 144 aaKnown RBP12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 OR2T1O43869 369 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 ALOX12BO75342 701 aa12.69□□□□□ -0.38
CALCOCO1-218ENST00000550804 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms