RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 AASSQ9UDR5 926 aa11.38□□□□□ -0.59
RAB5C-206ENST00000550406 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
RAB5C-206ENST00000550406 LOC100130705A0A1B0GUX0 176 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 CCDC182A6NF36 153 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 DEFB108AA8MXU0 73 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 PRR23D1E9PI22 279 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 TLX2O43763 284 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 MMP7P09237 267 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 PRR23D2P0DMB1 279 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 GABRB1P18505 474 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 NPR2P20594 1047 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 PEX19P40855 299 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 PTDSS1P48651 473 aaKnown RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 HSF2Q03933 536 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 PIGFQ07326 219 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 DAZAP2Q15038 168 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 AADACL4Q5VUY2 407 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 FBXW10Q5XX13 1052 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 ALKBH2Q6NS38 261 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 DNM1P34Q6PK57 102 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 CXXC5Q7LFL8 322 aaKnown RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 MDP1Q86V88 176 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 MYPOPQ86VE0 399 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 WFDC8Q8IUA0 241 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 SLC26A10Q8NG04 563 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 OR2T4Q8NH00 348 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 TMEM163Q8TC26 289 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF416Q9BWM5 594 aa11.37□□□□□ -0.59
RAB5C-206ENST00000550406 CRNNQ9UBG3 495 aaPredicted RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 SPTAN1Q13813 2472 aaKnown RBP11.37□□□□□ -0.59
RAB5C-206ENST00000550406 FAM221AA4D161 298 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 DPRXA6NFQ7 191 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 TVP23AA6NH52 213 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CLIC3O95833 236 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CELA3BP08861 270 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CST2P09228 141 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CD79AP11912 226 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CBR1P16152 277 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF32P17041 273 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 MSR1P21757 451 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CENPAP49450 140 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 UBE2NP61088 152 aaKnown RBP11.36□□□□□ -0.59
RAB5C-206ENST00000550406 TEKQ02763 1124 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 B3GLCTQ6Y288 498 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF584Q8IVC4 421 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CCDC36Q8IYA8 594 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 PROKR2Q8NFJ6 384 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 FAM81AQ8TBF8 368 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 OTULINQ96BN8 352 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 MUCL1Q96DR8 90 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 PLEKHA8Q96JA3 519 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 TEX12Q9BXU0 123 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 OR51V1Q9H2C8 321 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 WDR76Q9H967 626 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 MARCH7Q9H992 704 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 OBP2BQ9NPH6 170 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 KCNN3Q9UGI6 736 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 GMPPBQ9Y5P6 360 aa11.36□□□□□ -0.59
RAB5C-206ENST00000550406 CADP27708 2225 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 IGHV1-18A0A0C4DH31 117 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 GLCEO94923 617 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 FARS2O95363 451 aaKnown RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 IGKV3-15P01624 115 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 IGLV1-44P01699 117 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 COX6B1P14854 86 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 PAICSP22234 425 aaKnown RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 RPS27P42677 84 aaKnown RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 CAPZA2P47755 286 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF83P51522 516 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 AQP4P55087 323 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 CDC42P60953 191 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 LSM6P62312 80 aaKnown RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 RAB1AP62820 205 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 APOFQ13790 326 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 KEAP1Q14145 624 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 C1QTNF12Q5T7M4 302 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 SLC16A14Q7RTX9 510 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 DHRSXQ8N5I4 330 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 TEAD3Q99594 435 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
RAB5C-206ENST00000550406 RAI1Q7Z5J4 1906 aaPredicted RBP11.35□□□□□ -0.59
RAB5C-206ENST00000550406 A0A1W2PPR1 153 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 H0YJX3 145 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 WNT11O96014 354 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HRGP04196 525 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF14P17017 642 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HOXC12P31275 282 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 FMO3P31513 532 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 SNRPGP62308 76 aaKnown RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HIST1H3AP68431 136 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 PSG4Q00888 419 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 GLO1Q04760 184 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 RAB39AQ14964 217 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 PCK2Q16822 640 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 KLHL12Q53G59 568 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms