RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HLA-DOBP13765 273 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 APEHP13798 732 aaKnown RBP11.64□□□□□ -0.55
NUP188-211ENST00000550219 ZNF43P17038 809 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
NUP188-211ENST00000550219 SLC6A6P31641 620 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 PDLIM4P50479 330 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 RAD23AP54725 363 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
NUP188-211ENST00000550219 TAF11Q15544 211 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 SLC36A3Q495N2 470 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 FAM122BQ7Z309 247 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 PHC2Q8IXK0 858 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 GPR137CQ8N3F9 429 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 PIMREGQ9BSJ6 248 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 VCX3BQ9H321 246 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 SLC25A19Q9HC21 320 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 NRIP3Q9NQ35 241 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 INIPQ9NRY2 104 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 CA10Q9NS85 328 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
NUP188-211ENST00000550219 CDC42EP3Q9UKI2 254 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 OR6C65A6NJZ3 312 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 C11orf98E9PRG8 122 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 IMPA2O14732 288 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 ARPC3O15145 178 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 RNF13O43567 381 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TRAF3IP2O43734 574 aaPredicted RBP11.63□□□□□ -0.55
NUP188-211ENST00000550219 SLC43A1O75387 559 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TXNDC12O95881 172 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 F13BP05160 661 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 CELA3BP08861 270 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 FAM157CP0CG43 387 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 AHCYP23526 432 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 EPHA2P29317 976 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 CALCRP30988 508 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 POLR2IP36954 125 aaKnown RBP11.63□□□□□ -0.55
NUP188-211ENST00000550219 VHLP40337 213 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 CAPZA2P47755 286 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 GIPRP48546 466 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 IDH3GP51553 393 aaPredicted RBP11.63□□□□□ -0.55
NUP188-211ENST00000550219 CTXN1P60606 82 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 CDK5Q00535 292 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 NAAAQ02083 359 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 NPRL3Q12980 569 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 SNCBQ16143 134 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 ANKRD16Q6P6B7 361 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 UEVLDQ8IX04 471 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 LNX2Q8N448 690 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 OR52L1Q8NGH7 329 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TEX47Q8TBZ9 253 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 BCL2L2Q92843 193 aaPredicted RBP11.63□□□□□ -0.55
NUP188-211ENST00000550219 MBOAT4Q96T53 435 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 BEX2Q9BXY8 128 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 VCXQ9H320 206 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TXNIPQ9H3M7 391 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 NELFAQ9H3P2 528 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 TOR3AQ9H497 397 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 BAIAP2Q9UQB8 552 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 RCE1Q9Y256 329 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 ORC6Q9Y5N6 252 aa11.63□□□□□ -0.55
NUP188-211ENST00000550219 ARPC4-TTLL3A0A0A6YYG9 625 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 A0A1W2PRG6 482 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 H3BN98 237 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 PHF1O43189 567 aaPredicted RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 IDH3BO43837 385 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 SNAP29O95721 258 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 OR4A8P0C604 315 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 SERPINF1P36955 418 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 SH3BGRP55822 239 aaPredicted RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 ERVK-25P63136 954 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 ARF1P84077 181 aaKnown RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 PTGES3Q15185 160 aaKnown RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 CEACAM16Q2WEN9 425 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 CLEC12AQ5QGZ9 265 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 ARMC4Q5T2S8 1044 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 CARD17Q5XLA6 110 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 GPR139Q6DWJ6 353 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 MYPOPQ86VE0 399 aaPredicted RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 IGFN1Q86VF2 1251 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 ARIH2OSQ8N7S6 290 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 OR2T33Q8NG76 320 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 OR4Q3Q8NH05 313 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 LINC00470Q9BZP3 86 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 TBC1D23Q9NUY8 699 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 IL20RAQ9UHF4 553 aa11.62□□□□□ -0.55
NUP188-211ENST00000550219 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
NUP188-211ENST00000550219 B9A039 149 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 SLC16A6O15403 523 aa11.61□□□□□ -0.55
NUP188-211ENST00000550219 AKAP8O43823 692 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms