RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 GPA33Q99795 319 aa13.58□□□□□ -0.24
COX6A1-203ENST00000550009 FAM107BQ9H098 131 aa13.58□□□□□ -0.24
COX6A1-203ENST00000550009 MYLK2Q9H1R3 596 aa13.58□□□□□ -0.24
COX6A1-203ENST00000550009 SIAEQ9HAT2 523 aa13.58□□□□□ -0.24
COX6A1-203ENST00000550009 V9GYQ6 96 aa13.58□□□□□ -0.24
COX6A1-203ENST00000550009 C5orf49A4QMS7 147 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 EFCAB9A8MZ26 197 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 GSTA4O15217 222 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 SLC22A2O15244 555 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 MPZL1O95297 269 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 GPANK1O95872 356 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 IFNA2P01563 188 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 STOMP27105 288 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 MSX2P35548 267 aaPredicted RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 SLC9A3P48764 834 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 KLF3P57682 345 aaPredicted RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 SEC23BQ15437 767 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 TSTQ16762 297 aaKnown RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 IFI44LQ53G44 452 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 MESTQ5EB52 335 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 THSD4Q6ZMP0 1018 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 ZNF730Q6ZMV8 503 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 FKBP9P1Q75LS8 142 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 OAFQ86UD1 273 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 IPCEF1Q8WWN9 437 aaPredicted RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 GEMIN6Q8WXD5 167 aaKnown RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 SLC7A6Q92536 515 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 FAM46AQ96IP4 442 aaKnown RBP13.57□□□□□ -0.24
COX6A1-203ENST00000550009 ZNF416Q9BWM5 594 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 OR2H1Q9GZK4 316 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 RACGAP1Q9H0H5 632 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 MS4A5Q9H3V2 200 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 CCNB1IP1Q9NPC3 277 aa13.57□□□□□ -0.24
COX6A1-203ENST00000550009 TRBV4-1A0A0J9YWV2 114 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 IQCMA0A1B0GVH7 501 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 C17orf100A8MU93 164 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 PPIHO43447 177 aaKnown RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 SNAP29O95721 258 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ERCC1P07992 297 aaPredicted RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 APLNRP35414 380 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 GPR6P46095 362 aaPredicted RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 PSME3P61289 254 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 LMO4P61968 165 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 RPS23P62266 143 aaKnown RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 MVKQ03426 396 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 RINLQ6ZS11 566 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 FOXL2NBQ6ZUU3 175 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 MBOAT2Q6ZWT7 520 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 LINC01356Q8N9X3 169 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ZNF540Q8NDQ6 660 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 SLC25A40Q8TBP6 338 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 SLC7A13Q8TCU3 470 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ACOT11Q8WXI4 607 aaPredicted RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 LZICQ8WZA0 190 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 RDH5Q92781 318 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 FAM162AQ96A26 154 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 KCTD14Q9BQ13 255 aaPredicted RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ALG12Q9BV10 488 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 NMNAT1Q9HAN9 279 aaPredicted RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 HINT3Q9NQE9 182 aaKnown RBP13.56□□□□□ -0.24
COX6A1-203ENST00000550009 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ABCD2Q9UBJ2 740 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 FBXL3Q9UKT7 428 aa13.56□□□□□ -0.24
COX6A1-203ENST00000550009 ZSCAN5BA6NJL1 495 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 NPIPB13A6NJU9 1138 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 NPIPB4C9JG80 1138 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 CTLA4P16410 223 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 DRD4P21917 467 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 ACHEP22303 614 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 LSP1P33241 339 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 PLP2Q04941 152 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 NRN1LQ496H8 165 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 FAM27BQ5VT28 67 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 OR52J3Q8NH60 311 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 C7orf34Q96L11 122 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 HOPXQ9BPY8 73 aaPredicted RBP13.55□□□□□ -0.24
COX6A1-203ENST00000550009 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 NDUFAF4Q9P032 175 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 TMEFF2Q9UIK5 374 aaPredicted RBP13.55□□□□□ -0.24
COX6A1-203ENST00000550009 ENPP4Q9Y6X5 453 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 DOCK11Q5JSL3 2073 aa13.55□□□□□ -0.24
COX6A1-203ENST00000550009 TEX13CA0A0J9YWL9 993 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 SPRY3O43610 288 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 CCDC22O60826 627 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 IGHV1-46P01743 117 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 LIMS1P48059 325 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 ERFP50548 548 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 ZBED5Q49AG3 693 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 USP51Q70EK9 711 aa13.54□□□□□ -0.24
COX6A1-203ENST00000550009 ARPINQ7Z6K5 226 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms