RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 RHBDD3Q9Y3P4 386 aa3.19□□□□□ -1.9
CPNE8-206ENST00000549842 COMMD3-BMI1R4GMX3 469 aa3.19□□□□□ -1.9
CPNE8-206ENST00000549842 PCNX1Q96RV3 2341 aa3.19□□□□□ -1.9
CPNE8-206ENST00000549842 PHF3Q92576 2039 aaKnown RBP3.19□□□□□ -1.9
CPNE8-206ENST00000549842 ASXL1Q8IXJ9 1541 aa3.19□□□□□ -1.9
CPNE8-206ENST00000549842 MROH7-TTC4A0A0A0MT08 1334 aa3.19□□□□□ -1.9
CPNE8-206ENST00000549842 RIF1Q5UIP0 2472 aaKnown RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 COL2A1P02458 1487 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 SPEGQ15772 3267 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 A0A0J9YYE9 177 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 RBMY1BA6NDE4 496 aaKnown RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 RBMY1EA6NEQ0 496 aaKnown RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ERICH4A6NGS2 130 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 C12orf71A8MTZ7 269 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 M0R3G1 203 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ZNF780AO75290 641 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 SNAI1O95863 264 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 TRBC1P01850 177 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 RBMY1DP0C7P1 496 aaKnown RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 CCDC172P0C7W6 258 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 RBMY1A1P0DJD3 496 aaKnown RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 TUBG1P23258 451 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 TNFSF9P41273 254 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 SLC1A2P43004 574 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 GPR6P46095 362 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 RGRP47804 291 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ZNF45Q02386 682 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ECH1Q13011 328 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 IFT88Q13099 833 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 PGGHGQ32M88 737 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 VAX1Q5SQQ9 334 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 GPR157Q5UAW9 335 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ANKRD26P1Q6NSI1 321 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 SPESP1Q6UW49 350 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 BAIAP2L2Q6UXY1 529 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 CMTM1Q8IZ96 169 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 C8orf31Q8N9H6 132 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 NKAPP1Q8N9T2 125 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 LYPD6BQ8NI32 183 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ZNF502Q8TBZ5 544 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 MITD1Q8WV92 249 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 FRAT1Q92837 279 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-206ENST00000549842 TSG101Q99816 390 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 NICN1Q9BSH3 213 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 HES7Q9BYE0 225 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 ZYG11BQ9C0D3 744 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 NEUROG2Q9H2A3 272 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 PLGRKTQ9HBL7 147 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 TUBG2Q9NRH3 451 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 MARCH5Q9NX47 278 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 LGALS13Q9UHV8 139 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 CSAG2Q9Y5P2 127 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 SAR1BQ9Y6B6 198 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 FAM186AA6NE01 2351 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 CREBBPQ92793 2442 aa3.18□□□□□ -1.9
CPNE8-206ENST00000549842 LRRK1Q38SD2 2015 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 RLFQ13129 1914 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 A0A1W2PRD5 423 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 USP27XA6NNY8 438 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SERPINE3A8MV23 424 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ERVV-1B6SEH8 477 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 C12orf77C9JDV5 145 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 AIREO43918 545 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 CLPXO76031 633 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 CSTAP01040 98 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 MBP02144 154 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SERPINA5P05154 406 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SERPINE2P07093 398 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 PSMB1P20618 241 aaKnown RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 COX7A1P24310 79 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 FMO3P31513 532 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 LONP1P36776 959 aaKnown RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 VDAC2P45880 294 aaPredicted RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 DIO3P55073 304 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ARFRP1Q13795 201 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 HSP90AA4PQ58FG1 418 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 EOGTQ5NDL2 527 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 UTF1Q5T230 341 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 H3F3CQ6NXT2 135 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 CMC1Q7Z7K0 106 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SLC39A11Q8N1S5 342 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 OTUD6BQ8N6M0 293 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ZNF485Q8NCK3 441 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 VN1R2Q8NFZ6 395 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 OR9G1Q8NH87 305 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 CAPSLQ8WWF8 208 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 LRRC39Q96DD0 335 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ATOH8Q96SQ7 321 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SIKE1Q9BRV8 207 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 DEFB126Q9BYW3 111 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ACTR3CQ9C0K3 210 aaPredicted RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 SIAEQ9HAT2 523 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 NTN4Q9HB63 628 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ZNF275Q9NSD4 429 aaPredicted RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 QPCTLQ9NXS2 382 aa3.17□□□□□ -1.9
CPNE8-206ENST00000549842 CCDC59Q9P031 241 aaKnown RBP3.17□□□□□ -1.9
CPNE8-206ENST00000549842 ING4Q9UNL4 249 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms