RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 PLSCR5A0PG75 271 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 ANGPT2O15123 496 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 ICMTO60725 284 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 ACADSP16219 412 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 EGR1P18146 543 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 STOMP27105 288 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 MMP15P51511 669 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 MTPNP58546 118 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 RPL18Q07020 188 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 ZSCAN26Q16670 478 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 MBNL2Q5VZF2 373 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 CCDC80Q76M96 950 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 LRRC18Q8N456 261 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 SYT14Q8NB59 555 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 ICA1LQ8NDH6 482 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 VANGL1Q8TAA9 524 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 LIPHQ8WWY8 451 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 TAMM41Q96BW9 452 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 NMD3Q96D46 503 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 POM121L2Q96KW2 1035 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 DIRC2Q96SL1 478 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 EGLN1Q9GZT9 426 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 CCNB1IP1Q9NPC3 277 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 INIPQ9NRY2 104 aa10.92□□□□□ -0.66
PTCH1-218ENST00000548945 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
PTCH1-218ENST00000548945 RGS9O75916 674 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-218ENST00000548945 OR7A10O76100 309 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 FSHBP01225 129 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 IGHV1-46P01743 117 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 F13BP05160 661 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 FUT1P19526 365 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 FPR2P25090 351 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 GCH1P30793 250 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 SELPLGQ14242 412 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 TAF11Q15544 211 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 TSTQ16762 297 aaKnown RBP10.91□□□□□ -0.66
PTCH1-218ENST00000548945 ARMC4Q5T2S8 1044 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF101Q8IZC7 436 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 BPIFB2Q8N4F0 458 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 GAL3ST1Q99999 423 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 NANOGQ9H9S0 305 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 ZDHHC8Q9ULC8 765 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 UGT2A1Q9Y4X1 527 aa10.91□□□□□ -0.66
PTCH1-218ENST00000548945 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 HTR3EA5X5Y0 456 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 WIPF1O43516 503 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 UBOX5O94941 541 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 OR5F1O95221 314 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 CD55P08174 381 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 THRBP10828 461 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF32P17041 273 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 ADRA2CP18825 462 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 MAKP20794 623 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 CCNOP22674 350 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 WNT5AP41221 380 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 GDI2P50395 445 aaKnown RBP10.9□□□□□ -0.66
PTCH1-218ENST00000548945 CRYBA2P53672 197 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 GLO1Q04760 184 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 NFYCQ13952 458 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 VMACQ2NL98 169 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 ZMAT1Q5H9K5 638 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 FAM27BQ5VT28 67 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 TRPM8Q7Z2W7 1104 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 ALDH16A1Q8IZ83 802 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 OR10A6Q8NH74 314 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 KLF14Q8TD94 323 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-218ENST00000548945 IPCEF1Q8WWN9 437 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-218ENST00000548945 CCL17Q92583 94 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 GTF3AQ92664 365 aaKnown RBP10.9□□□□□ -0.66
PTCH1-218ENST00000548945 SGTBQ96EQ0 304 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 SLC6A7Q99884 636 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 TXNIPQ9H3M7 391 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 C7orf69Q9H7B7 122 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 OPN4Q9UHM6 478 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 BAG5Q9UL15 447 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 CACNG2Q9Y698 323 aa10.9□□□□□ -0.66
PTCH1-218ENST00000548945 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ERICH4A6NGS2 130 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 ZSCAN5BA6NJL1 495 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 SPRY3O43610 288 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 CCDC22O60826 627 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 FOXH1O75593 365 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 PRSS23O95084 383 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 SLC2A10O95528 541 aa10.89□□□□□ -0.67
PTCH1-218ENST00000548945 CST2P09228 141 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms