RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 NPR2P20594 1047 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 ENTPD1P49961 510 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 MRPS34P82930 218 aaKnown RBP25.32■■□□□ 1.64
BRF1-213ENST00000548421 KCNMB1Q16558 191 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 Q6ZT83 130 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 SLC35F2Q8IXU6 374 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 OR10H4Q8NGA5 316 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 JAM3Q9BX67 310 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 YIPF3Q9GZM5 350 aa25.32■■□□□ 1.64
BRF1-213ENST00000548421 A0A087WXM4 84 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 B8ZZF3 427 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 MT-ND2P03891 347 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 ADRA2AP08913 450 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 OR2T7P0C7T2 308 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 MSR1P21757 451 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 MPGP29372 298 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 OTPQ5XKR4 325 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 NCCRP1Q6ZVX7 275 aaPredicted RBP25.31■■□□□ 1.64
BRF1-213ENST00000548421 ATCAYQ86WG3 371 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 ACBD7Q8N6N7 88 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 OR2T27Q8NH04 317 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 RND1Q92730 232 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 NABP1Q96AH0 204 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 INPP5EQ9NRR6 644 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 ZNF629Q9UEG4 869 aaPredicted RBP25.31■■□□□ 1.64
BRF1-213ENST00000548421 SNX5Q9Y5X3 404 aa25.31■■□□□ 1.64
BRF1-213ENST00000548421 C12orf71A8MTZ7 269 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 ZNF593O00488 134 aaPredicted RBP25.3■■□□□ 1.64
BRF1-213ENST00000548421 SCG5P05408 212 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 MYL12AP19105 171 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 SGCAQ16586 387 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 NRN1LQ496H8 165 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 TEX30Q5JUR7 227 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 DPY19L4Q7Z388 723 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 CDC20BQ86Y33 519 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 SMAP2Q8WU79 429 aaPredicted RBP25.3■■□□□ 1.64
BRF1-213ENST00000548421 MNTQ99583 582 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 CDCA4Q9BXL8 241 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 EMC7Q9NPA0 242 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 KCNG2Q9UJ96 466 aa25.3■■□□□ 1.64
BRF1-213ENST00000548421 EXOSC1Q9Y3B2 195 aaKnown RBP25.3■■□□□ 1.64
BRF1-213ENST00000548421 EIF4E1BA6NMX2 242 aaKnown RBP25.29■■□□□ 1.64
BRF1-213ENST00000548421 CCL21O00585 134 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 PRB1P04280 392 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 SPARCP09486 303 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 SH3BGRP55822 239 aaPredicted RBP25.29■■□□□ 1.64
BRF1-213ENST00000548421 LSM6P62312 80 aaKnown RBP25.29■■□□□ 1.64
BRF1-213ENST00000548421 PCK2Q16822 640 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 C9orf135Q5VTT2 229 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 HTRA1Q92743 480 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 TBX5Q99593 518 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 OPN3Q9H1Y3 402 aaPredicted RBP25.29■■□□□ 1.64
BRF1-213ENST00000548421 SIAEQ9HAT2 523 aa25.29■■□□□ 1.64
BRF1-213ENST00000548421 SEC14L2O76054 403 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 SMIM18P0DKX4 95 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 HCCSP53701 268 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 FOXG1P55316 489 aaPredicted RBP25.28■■□□□ 1.64
BRF1-213ENST00000548421 ARF1P84077 181 aaKnown RBP25.28■■□□□ 1.64
BRF1-213ENST00000548421 RNLSQ5VYX0 342 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ZNF627Q7L945 461 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 SPARTQ8N0X7 666 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ZNF610Q8N9Z0 462 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 OTOSQ8NHW6 89 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 CDADC1Q9BWV3 514 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 PIGMQ9H3S5 423 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 CHCHD3Q9NX63 227 aaKnown RBP25.28■■□□□ 1.64
BRF1-213ENST00000548421 TAS2R16Q9NYV7 291 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 POLR1DQ9Y2S0 133 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 TMEM14AQ9Y6G1 99 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 DAPL1A0PJW8 107 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 TMCC2O75069 709 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ITGA5P08648 1049 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 PSKH1P11801 424 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 B4GALT1P15291 398 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 BMP5P22003 454 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 RPS27P42677 84 aaKnown RBP25.28■■□□□ 1.64
BRF1-213ENST00000548421 FAM27BQ5VT28 67 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ZNF813Q6ZN06 617 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 BEND4Q6ZU67 534 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ZNF843Q8N446 348 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 SLC22A24Q8N4F4 322 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ERVK13-1Q9NX77 482 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 LAMP5Q9UJQ1 280 aa25.28■■□□□ 1.64
BRF1-213ENST00000548421 ESPL1Q14674 2120 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 MYO7BQ6PIF6 2116 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 A0A1W2PQL4 384 aaPredicted RBP25.27■■□□□ 1.64
BRF1-213ENST00000548421 ZNF670-ZNF695F2Z2N8 137 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 ATP6V1B1P15313 513 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 ETV1P50549 477 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 IRF3Q14653 427 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 GABRG1Q8N1C3 465 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 SVOPQ8N4V2 548 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 ZNF454Q8N9F8 522 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 ZNF416Q9BWM5 594 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 MRPS26Q9BYN8 205 aaKnown RBP25.27■■□□□ 1.64
BRF1-213ENST00000548421 CYB5R1Q9UHQ9 305 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 COPS3Q9UNS2 423 aa25.27■■□□□ 1.64
BRF1-213ENST00000548421 FAM208BQ5VWN6 2430 aa25.26■■□□□ 1.64
BRF1-213ENST00000548421 NCOA6Q14686 2063 aaPredicted RBP25.26■■□□□ 1.63
BRF1-213ENST00000548421 TRIM64CA6NLI5 447 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms