RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 KAT8Q9H7Z6 458 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-205ENST00000548277 EVA1AQ9H8M9 152 aa10.12□□□□□ -0.79
TRAFD1-205ENST00000548277 UNKLQ9H9P5 680 aaKnown RBP10.12□□□□□ -0.79
TRAFD1-205ENST00000548277 SOX21Q9Y651 276 aaPredicted RBP10.12□□□□□ -0.79
TRAFD1-205ENST00000548277 LOC100509620A0A075B734 347 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 IGKV1D-43A0A0B4J1Z2 117 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 A0A1W2PRG6 482 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 TRAPPC13A5PLN9 417 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 ZSCAN5BA6NJL1 495 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 TRAPPC2LH3BP13 241 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 SHOX2O60902 331 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 SASH3O75995 380 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 NGFP01138 241 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 ACADSP16219 412 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 FUT1P19526 365 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 AQP2P41181 271 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 GDI2P50395 445 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 MMP15P51511 669 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 SEC61A1P61619 476 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 FMODQ06828 376 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 RPL18Q07020 188 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 LAPTM4AQ15012 233 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 PRR31Q5SQ13 230 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 SWT1Q5T5J6 900 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 METTL21CQ5VZV1 264 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 DPPA2Q7Z7J5 298 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 PATL1Q86TB9 770 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 NOXO1Q8NFA2 376 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 MOSPD2Q8NHP6 518 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 PFN4Q8NHR9 129 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 ABHD4Q8TB40 342 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 KLF14Q8TD94 323 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 LRRC58Q96CX6 371 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 MARS2Q96GW9 593 aaKnown RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 POM121L2Q96KW2 1035 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 SIKE1Q9BRV8 207 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 TMEM120AQ9BXJ8 343 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 EGLN1Q9GZT9 426 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 MEPEQ9NQ76 525 aaPredicted RBP10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 ZNF229Q9UJW7 825 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 NUP50Q9UKX7 468 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 NPTNQ9Y639 398 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 AUP1Q9Y679 476 aa10.11□□□□□ -0.79
TRAFD1-205ENST00000548277 FBP2O00757 339 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 TIMM8AO60220 97 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 MGRN1O60291 552 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 FOXH1O75593 365 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 GPANK1O95872 356 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 TNFRSF1BP20333 461 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 CD247P20963 164 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 OMGP23515 440 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 GATA3P23771 443 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PRTN3P24158 256 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PCGF2P35227 344 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 GZMMP51124 257 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 UGT2B15P54855 530 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PPP1CBP62140 327 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PSG4Q00888 419 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 SLC3A1Q07837 685 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 CD47Q08722 323 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 SF3A3Q12874 501 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 TOP3AQ13472 1001 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 CYLC2Q14093 348 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 HIST3H3Q16695 136 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 KLF17Q5JT82 389 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 FAM209AQ5JX71 171 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 NANOGP8Q6NSW7 305 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 NKAIN4Q8IVV8 208 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 SLC30A8Q8IWU4 369 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 ASB10Q8WXI3 467 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 HDAC2Q92769 488 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 TAMM41Q96BW9 452 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PRSS27Q9BQR3 290 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 MRPL13Q9BYD1 178 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 ZNF696Q9H7X3 374 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 NANOGQ9H9S0 305 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 SIAEQ9HAT2 523 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 INIPQ9NRY2 104 aa10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 PURGQ9UJV8 347 aaKnown RBP10.1□□□□□ -0.79
TRAFD1-205ENST00000548277 FSHBP01225 129 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 ZNF154Q13106 437 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 TAF11Q15544 211 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 VMACQ2NL98 169 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 PDLIM3Q53GG5 364 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 RABL3Q5HYI8 236 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 INTS11Q5TA45 600 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 ZNF774Q6NX45 483 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 RFPL4BQ6ZWI9 263 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 CLDN22Q8N7P3 220 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 DEFB108BQ8NET1 73 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 TMEM255BQ8WV15 326 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 C1orf147Q96MC9 270 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 MS4A7Q9GZW8 240 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
TRAFD1-205ENST00000548277 C20orf141Q9NUB4 165 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms