RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 CCDC80Q76M96 950 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 PEG10Q86TG7 708 aaKnown RBP17.31■□□□□ 0.36
SSH1-207ENST00000547862 MICU2Q8IYU8 434 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 GCDHQ92947 438 aaPredicted RBP17.31■□□□□ 0.36
SSH1-207ENST00000547862 SEPHS2Q99611 448 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 ECSITQ9BQ95 431 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 OR2J1Q9GZK6 312 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 SIAEQ9HAT2 523 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 STX18Q9P2W9 335 aaKnown RBP17.31■□□□□ 0.36
SSH1-207ENST00000547862 BAG5Q9UL15 447 aa17.31■□□□□ 0.36
SSH1-207ENST00000547862 TRIM77I1YAP6 450 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 HILS1P60008 231 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 LCN2P80188 198 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 CYLC2Q14093 348 aaPredicted RBP17.3■□□□□ 0.36
SSH1-207ENST00000547862 MMEL1Q495T6 779 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 ALG10Q5BKT4 473 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 C1QL2Q7Z5L3 287 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 ZFAND2BQ8WV99 257 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 GEMIN6Q8WXD5 167 aaKnown RBP17.3■□□□□ 0.36
SSH1-207ENST00000547862 C22orf15Q8WYQ4 148 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 RAB1CQ92928 201 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 TPD52L3Q96J77 140 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 POM121L2Q96KW2 1035 aa17.3■□□□□ 0.36
SSH1-207ENST00000547862 LOC100509620A0A075B734 347 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 CENPBD1B2RD01 187 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 EDF1O60869 148 aaKnown RBP17.29■□□□□ 0.36
SSH1-207ENST00000547862 RBMXP38159 391 aaKnown RBP17.29■□□□□ 0.36
SSH1-207ENST00000547862 PPP1CBP62140 327 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 PSG4Q00888 419 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 TAF11Q15544 211 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 BPIFB2Q8N4F0 458 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 TEX29Q8N6K0 151 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 C3orf56Q8N813 242 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 TSPEARQ8WU66 669 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 STON2Q8WXE9 905 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 TMEM120AQ9BXJ8 343 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 WNT5BQ9H1J7 359 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 TXNIPQ9H3M7 391 aa17.29■□□□□ 0.36
SSH1-207ENST00000547862 FXYD1O00168 92 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 MRASO14807 208 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 NR2C1P13056 603 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 IFI30P13284 250 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 LAP3P28838 519 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 ZNF133P52736 654 aaPredicted RBP17.28■□□□□ 0.36
SSH1-207ENST00000547862 SPRNQ5BIV9 151 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 FAM209AQ5JX71 171 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 SLC25A47Q6Q0C1 308 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 CALHM3Q86XJ0 350 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 KLF14Q8TD94 323 aaPredicted RBP17.28■□□□□ 0.36
SSH1-207ENST00000547862 LRRC58Q96CX6 371 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 MARS2Q96GW9 593 aaKnown RBP17.28■□□□□ 0.36
SSH1-207ENST00000547862 OR2H1Q9GZK4 316 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 SMURF2Q9HAU4 748 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 MSL2Q9HCI7 577 aa17.28■□□□□ 0.36
SSH1-207ENST00000547862 TRAV27A0A087WT01 109 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 HMGB1P1B2RPK0 211 aaPredicted RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 H7C1C5 153 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 TIMM8AO60220 97 aaPredicted RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 YAP1P46937 504 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 MMP15P51511 669 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 CTXN1P60606 82 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 LCN6P62502 163 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 CYBRD1Q53TN4 286 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 ZNF774Q6NX45 483 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 NMD3Q96D46 503 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 JMJD8Q96S16 334 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 DCLRE1CQ96SD1 692 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 SH3GL1Q99961 368 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 RBM4Q9BWF3 364 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 SUCNR1Q9BXA5 334 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 POLR2J2Q9GZM3 115 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 EGLN1Q9GZT9 426 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 POLR2J3Q9H1A7 115 aaKnown RBP17.27■□□□□ 0.36
SSH1-207ENST00000547862 DCAF16Q9NXF7 216 aa17.27■□□□□ 0.36
SSH1-207ENST00000547862 GMNCA6NCL1 334 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 SPRY1O43609 319 aaPredicted RBP17.26■□□□□ 0.35
SSH1-207ENST00000547862 NGFP01138 241 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 RPL27P61353 136 aaKnown RBP17.26■□□□□ 0.35
SSH1-207ENST00000547862 ERICH5Q6P6B1 374 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 UNQ6126/PRO20091Q6UXV3 157 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 OR8J3Q8NGG0 315 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 NANPQ8TBE9 248 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 ST7LQ8TDW4 575 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 FAM216AQ8WUB2 273 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 BPIFA2Q96DR5 249 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 PRRC1Q96M27 445 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 ALG12Q9BV10 488 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 C7orf69Q9H7B7 122 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 RHCGQ9UBD6 479 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 HIF3AQ9Y2N7 669 aa17.26■□□□□ 0.35
SSH1-207ENST00000547862 J3QLI3 93 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 IFNA14P01570 189 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 GUCA1AP43080 201 aaPredicted RBP17.25■□□□□ 0.35
SSH1-207ENST00000547862 TNFAIP6P98066 277 aaPredicted RBP17.25■□□□□ 0.35
SSH1-207ENST00000547862 MBNL2Q5VZF2 373 aaKnown RBP17.25■□□□□ 0.35
SSH1-207ENST00000547862 USP43Q70EL4 1123 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 ALDH16A1Q8IZ83 802 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 OR13C2Q8NGS9 318 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 OR51A7Q8NH64 312 aa17.25■□□□□ 0.35
SSH1-207ENST00000547862 C10orf82Q8WW14 230 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms