RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	RTN4R	Q9BZR6	473 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	PTTG3P	Q9NZH4	202 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	PLSCR5	A0PG75	271 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	UPK3A	O75631	287 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	WNT11	O96014	354 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	GP1BB	P13224	206 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	RIDA	P52758	137 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	MFGE8	Q08431	387 aa	Predicted RBP	11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	PRSS35	Q8N3Z0	413 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	MAFIP	Q8WZ33	124 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	IGKV1D-42	A0A075B6H8	117 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374		A0A1B0GV50	99 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	OR4C45	A6NMZ5	311 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	KCNJ13	O60928	360 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	HTR3B	O95264	441 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	OR4E1	P0C645	316 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	HLA-DOB	P13765	273 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	DLST	P36957	453 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	MC2R	Q01718	297 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	TDG	Q13569	410 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	MOGAT2	Q3SYC2	334 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	RNASE10	Q5GAN6	216 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	GLT8D1	Q68CQ7	371 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	ZCCHC12	Q6PEW1	402 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374		Q6ZS52	159 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	OR13C9	Q8NGT0	318 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	VRK1	Q99986	396 aa	Predicted RBP	11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	SELENOI	Q9C0D9	397 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	PARP12	Q9H0J9	701 aa	Known RBP	11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC6A15	Q9H2J7	730 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	TREM1	Q9NP99	234 aa		11.74	□□□□□ -0.53
BRF1-210	ENST00000547374	TMEM269	A0A1B0GVZ9	245 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	EFCAB7	A8K855	629 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	DISC1	C4P0D8	188 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	FADS1	O60427	444 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	F12	P00748	615 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	CSF1	P09603	554 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	HTR2C	P28335	458 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	BAMBI	Q13145	260 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	ZNF169	Q14929	603 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	OR1J4	Q8NGS1	313 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	FLVCR1-AS1	Q8TAF5	88 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	LRRC46	Q96FV0	321 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	DMRTA2	Q96SC8	542 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	TSNAX	Q99598	290 aa	Known RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	POTEKP	Q9BYX7	375 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	APMAP	Q9HDC9	416 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	MSRA	Q9UJ68	235 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374		H7C417	338 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	XRCC3	O43542	346 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	CTLA4	P16410	223 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	IL13RA1	P78552	427 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC9A3R2	Q15599	337 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC18B1	Q6NT16	456 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	TEX19	Q8NA77	164 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SCARB1	Q8WTV0	552 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	ZBTB8A	Q96BR9	441 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	FGGY	Q96C11	551 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	NKX2-4	Q9H2Z4	354 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	MTFP1	Q9UDX5	166 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	FANCM	Q8IYD8	2048 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374		A0A0B4J2A0	478 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC22A23	A1A5C7	686 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	GSTZ1	O43708	216 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	PMP2	P02689	132 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	GLI4	P10075	376 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	CD1C	P29017	333 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	TTC9	Q92623	222 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC25A28	Q96A46	364 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	KLHDC7B	Q96G42	594 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC41A2	Q96JW4	573 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	MESP1	Q9BRJ9	268 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	HPF1	Q9NWY4	346 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	EPHA6	Q9UF33	1036 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	SHPK	Q9UHJ6	478 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	PLCL2	Q9UPR0	1127 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	CACNA1E	Q15878	2313 aa		11.73	□□□□□ -0.53
BRF1-210	ENST00000547374	TMEM272	A0A1B0GTI8	110 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	OR5H14	A6NHG9	310 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	GABRA1	P14867	456 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	ALOX5AP	P20292	161 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	IL11	P20809	199 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	KIR3DL2	P43630	455 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	DCXR	Q7Z4W1	244 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	SLC22A18AS	Q8N1D0	253 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	OR10H5	Q8NGA6	315 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	DCBLD2	Q96PD2	775 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	JAM3	Q9BX67	310 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	PRRC2C	Q9Y520	2896 aa	Known RBP	11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	TMEM212	A6NML5	194 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	FOXS1	O43638	330 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	FARS2	O95363	451 aa	Known RBP	11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	S100A10	P60903	97 aa		11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	POU3F1	Q03052	451 aa	Predicted RBP	11.72	□□□□□ -0.53
BRF1-210	ENST00000547374	ADGRG3	Q86Y34	549 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms