RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 COL11A1P12107 1806 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 SCN4AP35499 1836 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS1A0A191URI9 304 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZBTB42B2RXF5 422 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 FAM227AF5H4B4 570 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF354AO60765 605 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 LCATP04180 440 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS4P43632 304 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PNRC1Q12796 327 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 NFATC4Q14934 902 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 KIR2DS1Q14954 304 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 BTNL8Q6UX41 500 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 MCATQ8IVS2 390 aaKnown RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 OR4C16Q8NGL9 310 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 DAZAP1Q96EP5 407 aaKnown RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 OR51I2Q9H344 312 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF107Q9UII5 783 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 SERINC4A6NH21 518 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 CLDN34H7C241 214 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PLPP2O43688 288 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 GDI1P31150 447 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 CD70P32970 193 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 C8orf82Q6P1X6 216 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 SYT13Q7L8C5 426 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 SLC38A6Q8IZM9 456 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 NTNG2Q96CW9 530 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 LMAN1LQ9HAT1 526 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 A0A0J9YY10 115 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 M0R143 59 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 RAB27BO00194 218 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 OLFM2O95897 454 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CHRM4P08173 479 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MZT1Q08AG7 82 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 VWA2Q5GFL6 755 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CST9LP1Q5W188 147 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 GTF2H5Q6ZYL4 71 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM151BQ8IW70 566 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 GCNT2Q8N0V5 402 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CORO2AQ92828 525 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SORBS1Q9BX66 1292 aaKnown RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 B4GALT7Q9UBV7 327 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PRICKLE3O43900 615 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CTSCP53634 463 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TEAD2Q15562 447 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 NNATQ16517 81 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MRM1Q6IN84 353 aaKnown RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PAQR6Q6TCH4 344 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 HSD11B1LQ7Z5J1 315 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 BCDIN3DQ7Z5W3 292 aaKnown RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PPP1R3BQ86XI6 285 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM99Q8N816 258 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 GPR119Q8TDV5 335 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM255BQ8WV15 326 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 NMNAT3Q96T66 252 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 ABHD6Q9BV23 337 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 GDF2Q9UK05 429 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TBX19O60806 448 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 HOXB2P14652 356 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 GABRR1P24046 479 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 OR1D4P47884 311 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TM4SF4P48230 202 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CSNK1A1P48729 337 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 TPPP2P59282 170 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CD300CQ08708 224 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MEP1BQ16820 701 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 ST3GAL2Q16842 350 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MEX3DQ86XN8 651 aaKnown RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 NAXEQ8NCW5 288 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 OR52R1Q8NGF1 315 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 OR51A2Q8NGJ7 313 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 FOXJ1Q92949 421 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 URGCP-MRPS24S4R325 110 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 KIAA1217Q5T5P2 1943 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 CCKARP32238 428 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 DUSP8Q13202 625 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SSX1Q16384 188 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 AARDQ4LEZ3 155 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 DVL3Q92997 716 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-212ENST00000546744 KLHDC7BQ96G42 594 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SGCZQ96LD1 299 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 LPAR4Q99677 370 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 RTP3Q9BQQ7 232 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 SLC35B3Q9H1N7 401 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 PLEK2Q9NYT0 353 aa11.74□□□□□ -0.53
PTCH1-212ENST00000546744 MYOTQ9UBF9 498 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms