RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 HLA-GP17693 338 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NPBWR1P48145 328 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 KCNJ3P48549 501 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 SKP1P63208 163 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ADAM8P78325 824 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 PMPCAQ10713 525 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NOGQ13253 232 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 PPP1R1AQ13522 171 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 GPR18Q14330 331 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 MEF2DQ14814 521 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ELOCQ15369 112 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 SWI5Q1ZZU3 235 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 PLEKHN1Q494U1 663 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 MESTQ5EB52 335 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 SLC25A42Q86VD7 318 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 STOML3Q8TAV4 291 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 SFT2D1Q8WV19 159 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 RNF141Q8WVD5 230 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 PIK3IP1Q96FE7 263 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 AMELYQ99218 206 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 CKLFQ9UBR5 152 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ZNF107Q9UII5 783 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 KLK13Q9UKR3 277 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 DHDHQ9UQ10 334 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 DOCK9Q9BZ29 2069 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 EML5Q05BV3 1969 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 OR2W5A6NFC9 320 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 ZNF208O43345 1280 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 TXNDC12O95881 172 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 CRYBA1P05813 215 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 RPS21P63220 83 aaKnown RBP12.82□□□□□ -0.36
SRP54-202ENST00000546080 IL13RA1P78552 427 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 PDZK1IP1Q13113 114 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 OR7A5Q15622 319 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 GLYATL3Q5SZD4 288 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 TMEM225Q6GV28 225 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 ADGRE4PQ86SQ3 457 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 CD163Q86VB7 1156 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 ZFP82Q8N141 532 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 RCBTB1Q8NDN9 531 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 OR4K17Q8NGC6 315 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 RXFP4Q8TDU9 374 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 PRRT1Q99946 306 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 TMEM231Q9H6L2 316 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 Q9N2J8 555 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 LRIT1Q9P2V4 623 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 DTX4Q9Y2E6 619 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 LAMA3Q16787 3333 aa12.82□□□□□ -0.36
SRP54-202ENST00000546080 PRSS38A1L453 326 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 C9orf170A2RU37 121 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 KCNAB3O43448 404 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 NAT2P11245 290 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CD79AP11912 226 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 PGAM2P15259 253 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 S1PR1P21453 382 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 AVPR2P30518 371 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 AIMP2Q13155 320 aaKnown RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 ALG11Q2TAA5 492 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CDNFQ49AH0 187 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 RNASE10Q5GAN6 216 aaKnown RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 ASPHD2Q6ICH7 369 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 NPSR1Q6W5P4 371 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 RHOUQ7L0Q8 258 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 RTL10Q7L3V2 364 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 DMBX1Q8NFW5 382 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 OR4S1Q8NGB4 309 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 OR4C3Q8NH37 302 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 MITD1Q8WV92 249 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 DCUN1D4Q92564 292 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 SPACA7Q96KW9 195 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 VSTM2LQ96N03 204 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 TSPAN32Q96QS1 320 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 SEC11CQ9BY50 192 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 CST11Q9H112 138 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 ZNF304Q9HCX3 659 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 MMP26Q9NRE1 261 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 EDARQ9UNE0 448 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 A0A1W2PQU0 124 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 F8VVB4 439 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 F8VWA3 439 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 EIF1AYO14602 144 aaKnown RBP12.81□□□□□ -0.36
SRP54-202ENST00000546080 DOK2O60496 412 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
SRP54-202ENST00000546080 LINC00271P0C7V0 271 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 PNMTP11086 282 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 TACR3P29371 465 aa12.81□□□□□ -0.36
SRP54-202ENST00000546080 EIF1AXP47813 144 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms