RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SMURF2Q9HAU4 748 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 DCAF16Q9NXF7 216 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 UBAP1Q9NZ09 502 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 CCDC167Q9P0B6 97 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 ZDHHC8Q9ULC8 765 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 SLC7A7Q9UM01 511 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 INSIG2Q9Y5U4 225 aa14.07□□□□□ -0.16
CPSF7-225ENST00000545934 PLSCR5A0PG75 271 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 ISPDA4D126 451 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 TRAPPC13A5PLN9 417 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 POM121CA8CG34 1229 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 A8MXK9 166 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 EVPLLA8MZ36 301 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 KPNA4O00629 521 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-225ENST00000545934 OPN1SWP03999 348 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 HIST1H2ABP04908 130 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 CD247P20963 164 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 CCNOP22674 350 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 GCH1P30793 250 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 SLC6A9P48067 706 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 STX1BP61266 288 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 RPL18Q07020 188 aaKnown RBP14.06□□□□□ -0.16
CPSF7-225ENST00000545934 RUNDC3AQ59EK9 446 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 ARMCX4Q5H9R4 360 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 ARMC4Q5T2S8 1044 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 HIST3H2AQ7L7L0 130 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 NANOGNBQ7Z5D8 188 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 GEMIN6Q8WXD5 167 aaKnown RBP14.06□□□□□ -0.16
CPSF7-225ENST00000545934 HIST1H2ACQ93077 130 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 DUX5Q96PT3 197 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 DIRC2Q96SL1 478 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 PARD6BQ9BYG5 372 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 PATZ1Q9HBE1 687 aaKnown RBP14.06□□□□□ -0.16
CPSF7-225ENST00000545934 AUP1Q9Y679 476 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 VWFP04275 2813 aa14.06□□□□□ -0.16
CPSF7-225ENST00000545934 IGKV1D-43A0A0B4J1Z2 117 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 C5orf49A4QMS7 147 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 NPIPB13A6NJU9 1138 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 NPIPB4C9JG80 1138 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 F5H0A9 414 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-225ENST00000545934 M0QX08 132 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 SLC2A10O95528 541 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 F13BP05160 661 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 CDAP32320 146 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 SEC61A1P61619 476 aaKnown RBP14.05□□□□□ -0.16
CPSF7-225ENST00000545934 IL13RA1P78552 427 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 PSG4Q00888 419 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 BAMBIQ13145 260 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 CDK5R2Q13319 367 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 OCLNQ16625 522 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 TMEM155Q4W5P6 130 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 UNQ6126/PRO20091Q6UXV3 157 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 ZNF283Q8N7M2 679 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 C11orf65Q8NCR3 313 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 AKR7LQ8NHP1 331 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 CCNB1IP1Q9NPC3 277 aa14.05□□□□□ -0.16
CPSF7-225ENST00000545934 EIF3KQ9UBQ5 218 aaKnown RBP14.05□□□□□ -0.16
CPSF7-225ENST00000545934 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.05□□□□□ -0.16
CPSF7-225ENST00000545934 V9GYY5 206 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-225ENST00000545934 A0A1W2PRG6 482 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 BLOC1S5-TXNDC5H3BN57 136 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 NGFP01138 241 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 IGF2P01344 180 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 UMPSP11172 480 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 IDH3AP50213 366 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 GDI2P50395 445 aaKnown RBP14.04□□□□□ -0.16
CPSF7-225ENST00000545934 DAP3P51398 398 aaKnown RBP14.04□□□□□ -0.16
CPSF7-225ENST00000545934 PPP1CBP62140 327 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 FAM27BQ5VT28 67 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 SLC25A47Q6Q0C1 308 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 C9orf139Q6ZV77 190 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 HDDC2Q7Z4H3 204 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 LIPHQ8WWY8 451 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 HDAC2Q92769 488 aaKnown RBP14.04□□□□□ -0.16
CPSF7-225ENST00000545934 SIGLEC11Q96RL6 698 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 WNT5BQ9H1J7 359 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 KCNN2Q9H2S1 579 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 MSL2Q9HCI7 577 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 TMEM106BQ9NUM4 274 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-225ENST00000545934 EGFL7Q9UHF1 273 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 RAB21Q9UL25 225 aa14.04□□□□□ -0.16
CPSF7-225ENST00000545934 POLR3GO15318 223 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-225ENST00000545934 OR7A10O76100 309 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 TGDSO95455 350 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 MT-ND1P03886 318 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 SBK2P0C263 348 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 RBMXP38159 391 aaKnown RBP14.03□□□□□ -0.16
CPSF7-225ENST00000545934 AQP2P41181 271 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 CRYBA2P53672 197 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 PAX2Q02962 417 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 PAX8Q06710 450 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 FMODQ06828 376 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 SELPLGQ14242 412 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 SLC9A3R2Q15599 337 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 ZMAT1Q5H9K5 638 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 FOXL2NBQ6ZUU3 175 aa14.03□□□□□ -0.16
CPSF7-225ENST00000545934 LRRC28Q86X40 367 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 195.2 ms