RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR4N2Q8NGD1 307 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 PIGMQ9H3S5 423 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL4A6-209ENST00000545689 CHST2Q9Y4C5 530 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 RFXAPO00287 272 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 BET1O15155 118 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 DFFBO76075 338 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 CEACAM5P06731 702 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 KIR2DS4P43632 304 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 FABP5Q01469 135 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 RBPJQ06330 500 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 DPPA2Q7Z7J5 298 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 CNEP1R1Q8N9A8 125 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 OR51S1Q8NGJ8 323 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 UCN3Q969E3 161 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 MED30Q96HR3 178 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 NGBQ9NPG2 151 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF346Q9UL40 294 aaKnown RBP11.44□□□□□ -0.58
COL4A6-209ENST00000545689 DOK2O60496 412 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ABHD16AO95870 558 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 NKAIN1Q4KMZ8 207 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 PLPP5Q8NEB5 264 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 OR52I2Q8NH67 350 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 MARC2Q969Z3 335 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 KIRREL1Q96J84 757 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ZNF576Q9H609 170 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 RNF167Q9H6Y7 350 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SPACA1Q9HBV2 294 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 COQ3Q9NZJ6 369 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 B3GALT5Q9Y2C3 310 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 KCNE1BA0A087WTH5 132 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 A0A1B0GUH1 482 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ARGFXA6NJG6 315 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 PRAMEF4O60810 478 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 FBXO24O75426 580 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 CBX7O95931 251 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 IGFBP1P08833 259 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SRP9P49458 86 aaKnown RBP11.44□□□□□ -0.58
COL4A6-209ENST00000545689 C21orf58P58505 322 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 IAH1Q2TAA2 248 aaPredicted RBP11.44□□□□□ -0.58
COL4A6-209ENST00000545689 A6NL46 340 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 ALX3O95076 343 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 UBE2KP61086 200 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SFRP5Q5T4F7 317 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 SEC22AQ96IW7 307 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 TXNIPQ9H3M7 391 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 PADI1Q9ULC6 663 aa11.44□□□□□ -0.58
COL4A6-209ENST00000545689 A0A1B0GTL3 188 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 OR6C65A6NJZ3 312 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SERPINA7P05543 415 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 LHX8Q68G74 356 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SLAMF6Q96DU3 332 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 R4GMQ9 66 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 A0A087WZY1 265 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SLC2A10O95528 541 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 WNT11O96014 354 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 MSL3P1P0C860 447 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 EBPQ15125 230 aaKnown RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 ACKR1Q16570 336 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 PDLIM3Q53GG5 364 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 RNLSQ5VYX0 342 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 FJX1Q86VR8 437 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 HSD17B8Q92506 261 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 DVL3Q92997 716 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 ZCCHC4Q9H5U6 513 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 ARPC4-TTLL3A0A0A6YYG9 625 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 C1QAP02745 245 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 CYB561P49447 251 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 RPL18Q07020 188 aaKnown RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 TMEM31Q5JXX7 168 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 PAQR6Q6TCH4 344 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 TMEM200AQ86VY9 491 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 GABRG1Q8N1C3 465 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 NANPQ8TBE9 248 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 JAM3Q9BX67 310 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 TMEFF2Q9UIK5 374 aaPredicted RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 C2orf72A6NCS6 295 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SGCEO43556 437 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 CSF3P09919 207 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 TBC1D28Q2M2D7 210 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 MRGPRX4Q96LA9 322 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 PBX4Q9BYU1 374 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SLC25A32Q9H2D1 315 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 GAREM1Q9H706 876 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 SLC23A2Q9UGH3 650 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
COL4A6-209ENST00000545689 PRSS37A4D1T9 235 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 AGAP14A8MT82 685 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 FCMRO60667 390 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 AKR7A3O95154 331 aa11.43□□□□□ -0.58
COL4A6-209ENST00000545689 CTF1Q16619 201 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms