RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 POLR2JP52435 117 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 KRTAP10-11P60412 298 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 UFM1P61960 85 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 GPAT3Q53EU6 434 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 MRPL2Q5T653 305 aaKnown RBP12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 CGB2Q6NT52 195 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 PIGWQ7Z7B1 504 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 KLBQ86Z14 1044 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 ZNF417Q8TAU3 575 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 OIT3Q8WWZ8 545 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 ZNF587Q96SQ5 575 aaPredicted RBP12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 ULBP2Q9BZM5 246 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 BCL2L14Q9BZR8 327 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 ACOXLQ9NUZ1 547 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 BTNL2Q9UIR0 455 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 RYR1P21817 5038 aa12.77□□□□□ -0.37
CLSTN3-216ENST00000545663 DCTN3O75935 186 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 AHSA1O95433 338 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 CD55P08174 381 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 ADH4P08319 380 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 PRG2P13727 222 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 RPS2P15880 293 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 CBLP22681 906 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 UQCRC2P22695 453 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 MDH2P40926 338 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 TXNL4AP83876 142 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 EGR4Q05215 589 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 ZNF101Q8IZC7 436 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 SLC22A24Q8N4F4 322 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 ANKFN1Q8N957 763 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 OR52E6Q96RD3 313 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 HERC2O95714 4834 aa12.76□□□□□ -0.37
CLSTN3-216ENST00000545663 CCDC154A6NI56 674 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 MS4A18H0YCH9 400 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 SNAP29O95721 258 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 UQCRBP14927 111 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 MSX2P35548 267 aaPredicted RBP12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 ANXA11P50995 505 aaKnown RBP12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 MS4A18Q3C1V0 323 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 AGKQ53H12 422 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 SPANXN4Q5MJ08 99 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 CASC10Q5T4H9 136 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 SLC27A4Q6P1M0 643 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 NHLRC1Q6VVB1 395 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 WDR88Q6ZMY6 472 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 LDLRAD3Q86YD5 345 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 OR6N1Q8NGY5 312 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 MIPOL1Q8TD10 442 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 ITCHQ96J02 903 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 LRR1Q96L50 414 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 CCDC115Q96NT0 180 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 RNF121Q9H920 327 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 B3GAT2Q9NPZ5 323 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 SAR1AQ9NR31 198 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 CCDC167Q9P0B6 97 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 CAPN7Q9Y6W3 813 aa12.75□□□□□ -0.37
CLSTN3-216ENST00000545663 BBIP1A8MTZ0 92 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 NDUFAB1O14561 156 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 CCNOP22674 350 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 GTF2E2P29084 291 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 GABRA5P31644 462 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 CFHR2P36980 270 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 NME5P56597 212 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 CDK5R2Q13319 367 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 SYPL1Q16563 259 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 ZNF718Q3SXZ3 478 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 RUNDC3AQ59EK9 446 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 COQ5Q5HYK3 327 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 ZBTB37Q5TC79 503 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 WBP2NLQ6ICG8 309 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 OR4F3Q6IEY1 312 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 SLC25A40Q8TBP6 338 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 KLF14Q8TD94 323 aaPredicted RBP12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 STK35Q8TDR2 534 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 TAAR8Q969N4 342 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 R3HDM4Q96D70 268 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 SPDL1Q96EA4 605 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 PANX1Q96RD7 426 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 OR2J1Q9GZK6 312 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 SLC38A1Q9H2H9 487 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 ZDHHC8Q9ULC8 765 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 U3KQK5 164 aa12.74□□□□□ -0.37
CLSTN3-216ENST00000545663 IGHV1-69DA0A0B4J2H0 117 aa12.73□□□□□ -0.37
CLSTN3-216ENST00000545663 LCE6AA0A183 80 aa12.73□□□□□ -0.37
CLSTN3-216ENST00000545663 C22orf46C9J442 243 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms