RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 COL3A1P02461 1466 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 H3BML4 177 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FZD9O00144 591 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 P2RY10O00398 339 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FCN1O00602 326 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 RRASP10301 218 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 RPL17P18621 184 aaKnown RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ELAVL4P26378 380 aaKnown RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 AWAT1Q58HT5 328 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 SPANXN5Q5MJ07 72 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 C22orf39Q6P5X5 142 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 OR5M1Q8NGP8 315 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 OR5B2Q96R09 309 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 NMNAT3Q96T66 252 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 BOCQ9BWV1 1114 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 MUTYHQ9UIF7 546 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 TRAPPC4Q9Y296 219 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 LMTK2Q8IWU2 1503 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FITM1A5D6W6 292 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GFRA2O00451 464 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 AIFM1O95831 613 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 PTGER1P34995 402 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GHRHRQ02643 423 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 PRICKLE2Q7Z3G6 844 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GRINAQ7Z429 371 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CMTM4Q8IZR5 234 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CARFQ8N187 725 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FBXO22Q8NEZ5 403 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 STARD4Q96DR4 205 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GPA33Q99795 319 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 NUDT16L1Q9BRJ7 211 aaKnown RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 OR51M1Q9H341 326 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 HEYLQ9NQ87 328 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 DLL4Q9NR61 685 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 PPP6CO00743 305 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CXCL11O14625 94 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 YIF1AO95070 293 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GYPAP02724 150 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CHRM4P08173 479 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 DAOP14920 347 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CASP6P55212 293 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ZP2Q05996 745 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ST3GAL2Q16842 350 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CERS5Q8N5B7 392 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GOT1L1Q8NHS2 421 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FIBINQ8TAL6 211 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 NMES1Q9C002 83 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CGGBP1Q9UFW8 167 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GAGE10A6NGK3 116 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 H7C1C5 153 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CDK2AP1O14519 115 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 HRO43593 1189 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 SELENOFO60613 162 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 TAS2R60P59551 318 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 CXCL9Q07325 125 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 OR5K2Q8NHB8 316 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 VN1R17PQ8TDU5 208 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 WFIKKN2Q8TEU8 576 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 APH1AQ96BI3 265 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FAM163AQ96GL9 167 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 NTPCRQ9BSD7 190 aaKnown RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 HERPUD2Q9BSE4 406 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 PLA2G12AQ9BZM1 189 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 WDR76Q9H967 626 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 DNAJB11Q9UBS4 358 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 EMC9Q9Y3B6 208 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 PTPRMP28827 1452 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 F13BP05160 661 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ZNF888P0CJ79 500 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 IAPPP10997 89 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ELOBQ15370 118 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GABRA6Q16445 453 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ZNF468Q5VIY5 522 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 NPSR1Q6W5P4 371 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 GLDNQ6ZMI3 551 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-216ENST00000545170 ZNF765Q7L2R6 523 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 LRRC18Q8N456 261 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 MBD3L1Q8WWY6 194 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 FGGYQ96C11 551 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 UBXN10Q96LJ8 280 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 TRIB1Q96RU8 372 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 OR6C3Q9NZP0 311 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
ATXN3-216ENST00000545170 AFDNP55196 1824 aaKnown RBP7.94□□□□□ -1.14
ATXN3-216ENST00000545170 OLFM2O95897 454 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 ATXN1LP0C7T5 689 aaKnown RBP7.94□□□□□ -1.14
ATXN3-216ENST00000545170 PIPP12273 146 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-216ENST00000545170 RPEL1Q2QD12 228 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 PHF19Q5T6S3 580 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 HSD17B13Q7Z5P4 300 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-216ENST00000545170 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 PTRH1Q86Y79 214 aaKnown RBP7.94□□□□□ -1.14
ATXN3-216ENST00000545170 ARFGAP1Q8N6T3 406 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 KCNJ15Q99712 375 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 CHRDL1Q9BU40 450 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 OR2D2Q9H210 308 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 PPP1R3CQ9UQK1 317 aa7.94□□□□□ -1.14
ATXN3-216ENST00000545170 SETD1AO15047 1707 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms