RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NRIP2Q9BQI9 281 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 MGME1Q9BQP7 344 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF559Q9BR84 538 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 RIOK2Q9BVS4 552 aaKnown RBP4.17□□□□□ -1.74
CNGA1-209ENST00000544810 ADGRE3Q9BY15 652 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 STRADBQ9C0K7 418 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 C1orf198Q9H425 327 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 PRDM13Q9H4Q3 707 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 SEC61A2Q9H9S3 476 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 CHMP1AQ9HD42 196 aaPredicted RBP4.17□□□□□ -1.74
CNGA1-209ENST00000544810 A4GALTQ9NPC4 353 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 KRCC1Q9NPI7 259 aaPredicted RBP4.17□□□□□ -1.74
CNGA1-209ENST00000544810 PARPBPQ9NWS1 579 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 RCC2Q9P258 522 aaKnown RBP4.17□□□□□ -1.74
CNGA1-209ENST00000544810 FLVCR2Q9UPI3 526 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 RCE1Q9Y256 329 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 LRRK1Q38SD2 2015 aa4.17□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3DA0A087WVF3 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3IA0A087WXS9 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3EA0A087X179 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3KA0A087X1G2 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3FA6NER0 549 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3LB9A6J9 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 F8VVB4 439 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 F8VWA3 439 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TSTD3H0UI37 97 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SIGLEC5O15389 551 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TXNL1O43396 289 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 EMC8O43402 210 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 PRAMEF11O60813 436 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NME6O75414 186 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SLC25A12O75746 678 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 GATBO75879 557 aaKnown RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 MOCS2O96007 188 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 RAB40ALP0C0E4 278 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3HP0C7X1 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 PRSS56P0CW18 603 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ETFAP13804 333 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF7P17097 686 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CD82P27701 267 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SHC1P29353 583 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 IFNGR2P38484 337 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 GLP1RP43220 463 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CDX1P47902 265 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SLC6A12P48065 614 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ANXA11P50995 505 aaKnown RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CDH11P55287 796 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 EIF5AP63241 154 aaKnown RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 BIKQ13323 160 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ALKBH1Q13686 389 aaKnown RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 INPP5JQ15735 1006 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CPSF6Q16630 551 aaKnown RBP eCLIP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SLC5A12Q1EHB4 618 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 POM121L1PQ3SYA9 428 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 C10orf120Q5SQS8 335 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 PHF19Q5T6S3 580 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 C9orf64Q5T6V5 341 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 GLT8D1Q68CQ7 371 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3GQ6DHY5 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SFRP4Q6FHJ7 346 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3CQ6IPX1 549 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF613Q6PF04 617 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 APOOLQ6UXV4 268 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NHLRC1Q6VVB1 395 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 FAM83HQ6ZRV2 1179 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 BCDIN3DQ7Z5W3 292 aaKnown RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 GID4Q8IVV7 300 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 PIANPQ8IYJ0 282 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TBC1D3Q8IZP1 549 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 BEND2Q8NDZ0 799 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SLC30A7Q8NEW0 376 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 OR6N1Q8NGY5 312 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 FCAMRQ8WWV6 532 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 RAB40AQ8WXH6 277 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NAT6Q93015 286 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CHST5Q9GZS9 411 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 UBQLN3Q9H347 655 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 FBXO44Q9H4M3 255 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NKIRAS2Q9NYR9 191 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TAS2R8Q9NYW2 309 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 VPS29Q9UBQ0 182 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SCML2Q9UQR0 700 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 LOXL2Q9Y4K0 774 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TIMM10BQ9Y5J6 103 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 HS3ST4Q9Y661 456 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ARID1BQ8NFD5 2236 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 NF1P21359 2839 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TRAV14DV4A0A0A6YYC5 116 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 GGT3PA6NGU5 568 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 C9orf172C9J069 976 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 MFNGO00587 321 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 TCAPO15273 167 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ARL6IP5O75915 188 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 ACTL6AO96019 429 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 SERPINA5P05154 406 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 CD2P06729 351 aa4.16□□□□□ -1.74
CNGA1-209ENST00000544810 IGFBP1P08833 259 aaPredicted RBP4.16□□□□□ -1.74
CNGA1-209ENST00000544810 APEHP13798 732 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms