RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SEC23BQ15437 767 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 PABPC1L2AQ5JQF8 200 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 RGS7BPQ6MZT1 257 aaPredicted RBP20.03■□□□□ 0.8
CHFR-222ENST00000544093 DPY19L2P2Q6ZN68 376 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 SYT9Q86SS6 491 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 C1orf174Q8IYL3 243 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 MRPL37Q9BZE1 423 aaKnown RBP20.03■□□□□ 0.8
CHFR-222ENST00000544093 GPR160Q9UJ42 338 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 PRSS37A4D1T9 235 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 CD5LO43866 347 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 LY6HO94772 140 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 APEHP13798 732 aaKnown RBP20.02■□□□□ 0.8
CHFR-222ENST00000544093 ZNF32P17041 273 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 MSR1P21757 451 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 STOMP27105 288 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 RPS6KA3P51812 740 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 KRR1Q13601 381 aaKnown RBP20.02■□□□□ 0.8
CHFR-222ENST00000544093 ZDHHC21Q8IVQ6 265 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 CLDN22Q8N7P3 220 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 Q96M85 177 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 PRPF19Q9UMS4 504 aaKnown RBP20.02■□□□□ 0.8
CHFR-222ENST00000544093 TIMM10BQ9Y5J6 103 aa20.02■□□□□ 0.8
CHFR-222ENST00000544093 A0A096LNT2 108 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 A0A1W2PPL8 197 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 C12orf71A8MTZ7 269 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 ZNF26P17031 533 aaPredicted RBP20.01■□□□□ 0.79
CHFR-222ENST00000544093 USF1P22415 310 aaPredicted RBP20.01■□□□□ 0.79
CHFR-222ENST00000544093 FPR3P25089 353 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 LAP3P28838 519 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 KRTAP1-1Q07627 177 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 MESTQ5EB52 335 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 SMARCD3Q6STE5 483 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 LINC00471Q8N535 108 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 C11orf40Q8WZ69 217 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 EIF3KQ9UBQ5 218 aaKnown RBP20.01■□□□□ 0.79
CHFR-222ENST00000544093 REV1Q9UBZ9 1251 aa20.01■□□□□ 0.79
CHFR-222ENST00000544093 CHD3Q12873 2000 aaKnown RBP20.01■□□□□ 0.79
CHFR-222ENST00000544093 TEX13CA0A0J9YWL9 993 aa20■□□□□ 0.79
CHFR-222ENST00000544093 OR10H3O60404 316 aa20■□□□□ 0.79
CHFR-222ENST00000544093 ADRA2AP08913 450 aa20■□□□□ 0.79
CHFR-222ENST00000544093 DAOP14920 347 aa20■□□□□ 0.79
CHFR-222ENST00000544093 APEX1P27695 318 aaKnown RBP20■□□□□ 0.79
CHFR-222ENST00000544093 RRM2P31350 389 aa20■□□□□ 0.79
CHFR-222ENST00000544093 UCP2P55851 309 aa20■□□□□ 0.79
CHFR-222ENST00000544093 MOGQ16653 247 aa20■□□□□ 0.79
CHFR-222ENST00000544093 CPEB3Q8NE35 698 aaKnown RBP20■□□□□ 0.79
CHFR-222ENST00000544093 C1orf21Q9H246 121 aa20■□□□□ 0.79
CHFR-222ENST00000544093 POLE4Q9NR33 117 aa20■□□□□ 0.79
CHFR-222ENST00000544093 DUSP13Q9UII6 198 aa20■□□□□ 0.79
CHFR-222ENST00000544093 ADAM21Q9UKJ8 722 aa20■□□□□ 0.79
CHFR-222ENST00000544093 A0A1W2PPW3 197 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 VWC2LB2RUY7 222 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 TXNDC12O95881 172 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 LCKP06239 509 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 FAM157BP0CG42 384 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 CCL2P13500 99 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 ZNF250P15622 560 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 NR4A2P43354 598 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 GDI2P50395 445 aaKnown RBP19.99■□□□□ 0.79
CHFR-222ENST00000544093 PSG4Q00888 419 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 TRIM25Q14258 630 aaKnown RBP19.99■□□□□ 0.79
CHFR-222ENST00000544093 TMEM249Q2WGJ8 235 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 LCN8Q6JVE9 175 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 ZER1Q7Z7L7 766 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 DHFR2Q86XF0 187 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 PAQR4Q8N4S7 273 aaPredicted RBP19.99■□□□□ 0.79
CHFR-222ENST00000544093 FANK1Q8TC84 345 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 SYT3Q9BQG1 590 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 OR2H1Q9GZK4 316 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 MAGIXQ9H6Y5 334 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 SLCO1C1Q9NYB5 712 aa19.99■□□□□ 0.79
CHFR-222ENST00000544093 VSX1Q9NZR4 365 aaPredicted RBP19.99■□□□□ 0.79
CHFR-222ENST00000544093 INAFM1C9JVW0 142 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 H7C1C5 153 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 IMPA2O14732 288 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 STAMBPO95630 424 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 SLC6A6P31641 620 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 HMGA2P52926 109 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 KLF3P57682 345 aaPredicted RBP19.98■□□□□ 0.79
CHFR-222ENST00000544093 LCN6P62502 163 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 SCRN3Q0VDG4 424 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 CARTPTQ16568 116 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 MSMPQ1L6U9 139 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 RFX4Q33E94 735 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 C1orf94Q6P1W5 598 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 DNM1P34Q6PK57 102 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 ARL9Q6T311 187 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 CYP2R1Q6VVX0 501 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 THSD4Q6ZMP0 1018 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 ZNF786Q8N393 782 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 SYNPRQ8TBG9 265 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 RASD2Q96D21 266 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 POM121L2Q96KW2 1035 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 ZNF416Q9BWM5 594 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 FAM53CQ9NYF3 392 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 NDRG4Q9ULP0 352 aaKnown RBP19.98■□□□□ 0.79
CHFR-222ENST00000544093 IER3IP1Q9Y5U9 82 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 RTTNQ86VV8 2226 aa19.98■□□□□ 0.79
CHFR-222ENST00000544093 YLPM1P49750 1951 aaKnown RBP19.97■□□□□ 0.79
CHFR-222ENST00000544093 IGLV3-9A0A075B6K5 115 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms