RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OR11H4Q8NGC9 324 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OR1K1Q8NGR3 316 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MFSD8Q8NHS3 518 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 SEH1LQ96EE3 360 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 CAPNS2Q96L46 248 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 SPATC1LQ9H0A9 340 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MYO18AQ92614 2054 aaKnown RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 C9JVG2 144 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 E9PQ18 207 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 H3BML4 177 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MRASO14807 208 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MTHFD2P13995 350 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 NTF3P20783 257 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 PIGAP37287 484 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 CLDN18P56856 261 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 GNG3P63215 75 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TLE1Q04724 770 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 KHDC3LQ587J8 217 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 LHX8Q68G74 356 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 LAIR1Q6GTX8 287 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OR4A47Q6IF82 309 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 Q6ZVH6 145 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 REPS2Q8NFH8 660 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 PSMG2Q969U7 264 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 HRASLS5Q96KN8 279 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OMDQ99983 421 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 THYN1Q9P016 225 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OR2A25A4D2G3 310 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TRAPPC13A5PLN9 417 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TMEM235A6NFC5 223 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MANSC4A6NHS7 340 aaPredicted RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TRDCB7Z8K6 153 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 SULT2B1O00204 365 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 BCAT2O15382 392 aaPredicted RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TRAPPC6AO75865 159 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 C8orf89P0DMQ9 161 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 RBMS1P29558 406 aaKnown RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 SSTR4P31391 388 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 PDLIM4P50479 330 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 EMX2Q04743 252 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MEF2DQ14814 521 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 UGCGQ16739 394 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 BSXQ3C1V8 233 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 SNAI3Q3KNW1 292 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MESTQ5EB52 335 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 IER5Q5VY09 327 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 MBNL2Q5VZF2 373 aaKnown RBP8.08□□□□□ -1.12
VPS13D-212ENST00000543766 C4orf19Q8IY42 314 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 HIST1H2BAQ96A08 127 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 ZBTB8AQ96BR9 441 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 ZNF350Q9GZX5 532 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 OR51I2Q9H344 312 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 HEXA-AS1Q9H8Q6 139 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 DOK5Q9P104 306 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 TPRKBQ9Y3C4 175 aa8.08□□□□□ -1.12
VPS13D-212ENST00000543766 A0A1W2PPC4 97 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 RNF212BA8MTL3 300 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 NPIPB9F8W1W9 429 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 CORTO00230 105 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 PSG1P11464 419 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 MYF5P13349 255 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 SIRPB2Q5JXA9 342 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 ST8SIA1Q92185 356 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 SLC35E1Q96K37 410 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 SENP8Q96LD8 212 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 MRPL57Q9BQC6 102 aaKnown RBP8.07□□□□□ -1.12
VPS13D-212ENST00000543766 RRAGCQ9HB90 399 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 CUTCQ9NTM9 273 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 SELENOKQ9Y6D0 94 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 G3V3Y1 287 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 SYT7O43581 403 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 OR4F21O95013 312 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 LSM8O95777 96 aaKnown RBP8.07□□□□□ -1.12
VPS13D-212ENST00000543766 DBHP09172 617 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 ACP2P11117 423 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 F3P13726 295 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 GPX3P22352 226 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 CD27P26842 260 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 GGT2P36268 569 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 IRF9Q00978 393 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 COMMD2Q86X83 199 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 HAVCR2Q8TDQ0 301 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 TMBIM1Q969X1 311 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 DIRAS2Q96HU8 199 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 IL4I1Q96RQ9 567 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 GPR174Q9BXC1 333 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 DPH1Q9BZG8 443 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 RERGLQ9H628 205 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 PLEK2Q9NYT0 353 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 KLRF1Q9NZS2 232 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 OTOFQ9HC10 1997 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 NPIPB13A6NJU9 1138 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 NPIPB4C9JG80 1138 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 ICAM1P05362 532 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 OR56A5P0C7T3 313 aa8.07□□□□□ -1.12
VPS13D-212ENST00000543766 OR1D2P34982 312 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms