RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LRRC34Q8IZ02 419 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SYCE1Q8N0S2 351 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 TMEM104Q8NE00 496 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OR4A15Q8NGL6 344 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OR13C9Q8NGT0 318 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OR56B4Q8NH76 319 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 PAQR8Q8TEZ7 354 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 ASZ1Q8WWH4 475 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 PSMG2Q969U7 264 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 TMA16Q96EY4 203 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SEC22AQ96IW7 307 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CEP19Q96LK0 163 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OLFM3Q96PB7 478 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 PSMB7Q99436 277 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 CIB1Q99828 191 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SHCBP1LQ9BZQ2 653 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 OPN3Q9H1Y3 402 aaPredicted RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 GAL3ST2Q9H3Q3 398 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 FGF22Q9HCT0 170 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 MYOZ2Q9NPC6 264 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 TIGARQ9NQ88 270 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 DYRK4Q9NR20 520 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 ARMC1Q9NVT9 282 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 SPRR3Q9UBC9 169 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 RPL26L1Q9UNX3 145 aaKnown RBP3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 HYOU1Q9Y4L1 999 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 HEY1Q9Y5J3 304 aa3.16□□□□□ -1.9
SFSWAP-211ENST00000542813 MUC6Q6W4X9 2439 aa3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 LAMB4A4D0S4 1761 aa3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 MYH7BA7E2Y1 1941 aa3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 MYH1P12882 1939 aa3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 GREB1LQ9C091 1923 aaPredicted RBP3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 MYH2Q9UKX2 1941 aa3.15□□□□□ -1.9
SFSWAP-211ENST00000542813 A0A1B0GWB2 263 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SYCE1LA8MT33 242 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM114B3SHH9 223 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 G3V3Y1 287 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 M0R3G1 203 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 RAD51CO43502 376 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SOX15O60248 233 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 UGT1A9O60656 530 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 GPX5O75715 221 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ALDOBP05062 364 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CT45A10P0DMU9 189 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF26P17031 533 aaPredicted RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CFL1P23528 166 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 LMO2P25791 158 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 HAAOP46952 286 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 GSK3BP49841 420 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 MAGOHP61326 146 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 GNA13Q14344 377 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC10A1Q14973 349 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ABRAXAS2Q15018 415 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 MOGQ16653 247 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 LIN52Q52LA3 116 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SOHLH1Q5JUK2 328 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SAMD4BQ5PRF9 694 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 PPM1LQ5SGD2 360 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 METTL21CQ5VZV1 264 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 DEGS2Q6QHC5 323 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF836Q6ZNA1 936 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 IFT20Q8IY31 132 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ZBED8Q8IZ13 594 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SVOPLQ8N434 492 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 C8orf31Q8N9H6 132 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ACOT4Q8N9L9 421 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 LRRC20Q8TCA0 184 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 DNAJC9Q8WXX5 260 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 GTF3AQ92664 365 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 MAGOHBQ96A72 148 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CCDC127Q96BQ5 260 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF501Q96CX3 271 aaPredicted RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CHMP6Q96FZ7 201 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 PAGE5Q96GU1 130 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 JSRP1Q96MG2 331 aaPredicted RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 DHRS9Q9BPW9 319 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 RBM4BQ9BQ04 359 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 UPF3AQ9H1J1 476 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC38A10Q9HBR0 1119 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 ADAP2Q9NPF8 381 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 GID8Q9NWU2 228 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CACNG5Q9UF02 275 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 MTRF1LQ9UGC7 380 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 HMGXB4Q9UGU5 601 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 LSM7Q9UK45 103 aaKnown RBP3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 CHD8Q9HCK8 2581 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 MROH7Q68CQ1 1323 aa3.15□□□□□ -1.91
SFSWAP-211ENST00000542813 NCOR1O75376 2440 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 A0A087X002 238 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PVALEFA0A1B0GWK0 134 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 OR6C74A6NCV1 312 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF705EA8MWA4 302 aaPredicted RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF487B1APH4 448 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 E9PQ18 207 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC17A2O00624 439 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PPP1R2P9O14990 202 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC22A1O15245 554 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SIVA1O15304 175 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 INSIG1O15503 277 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms