RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ACBD4Q8NC06 268 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 SEMA6CQ9H3T2 930 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 TMEM184BQ9Y519 407 aaPredicted RBP13.85□□□□□ -0.19
CNOT9-208ENST00000542068 KIF26BQ2KJY2 2108 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 TMEM82A0PJX8 343 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 TNFRSF10CO14798 259 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 PRAMEF2O60811 474 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 POU2F2P09086 479 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 CSF1P09603 554 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 GLULP15104 373 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 VAMP1P23763 118 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 YPEL5P62699 121 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 GLYATL3Q5SZD4 288 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 CHST4Q8NCG5 386 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 OR5M9Q8NGP3 310 aa13.85□□□□□ -0.19
CNOT9-208ENST00000542068 SCARF2Q96GP6 870 aaPredicted RBP13.85□□□□□ -0.19
CNOT9-208ENST00000542068 ATXN7L1Q9ULK2 861 aaPredicted RBP13.85□□□□□ -0.19
CNOT9-208ENST00000542068 IGHV5-51A0A0C4DH38 117 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 RHPN2P1A8MT19 583 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 EEF1E1-BLOC1S5C9J1V9 151 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 EIF1AYO14602 144 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 TNFSF14O43557 240 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 OPN1LWP04000 364 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 FGF2P09038 288 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 OR4E1P0C645 316 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 NR0B1P51843 470 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 C16orf47Q6ZP98 133 aaPredicted RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 GABRG1Q8N1C3 465 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 BPIFCQ8NFQ6 507 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 CMBLQ96DG6 245 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 NXF5Q9H1B4 397 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 PCOLCE2Q9UKZ9 415 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 PLCL2Q9UPR0 1127 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 CELSR3Q9NYQ7 3312 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 CACNA1EQ15878 2313 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 IGHV3-20A0A0C4DH32 117 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 C13orf42A0A1B0GVH6 325 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 TMEM235A6NFC5 223 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 S1PR1P21453 382 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 BLKP51451 505 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 EPHA4P54764 986 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 PRPS1P60891 318 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF169Q14929 603 aaPredicted RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 MESTQ5EB52 335 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 OR51A2Q8NGJ7 313 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 CTHRC1Q96CG8 243 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 NMNAT2Q9BZQ4 307 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 KIR3DL2P43630 455 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 CSNK1EP49674 416 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 MRPS21P82921 87 aaKnown RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 DMRTC1Q5HYR2 192 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 OVCH2Q7RTZ1 564 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 ZNF417Q8TAU3 575 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 VSTM2LQ96N03 204 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 INTS14Q96SY0 518 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 VRK1Q99986 396 aaPredicted RBP13.84□□□□□ -0.19
CNOT9-208ENST00000542068 G6PC3Q9BUM1 346 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 SLC39A1Q9NY26 324 aa13.84□□□□□ -0.19
CNOT9-208ENST00000542068 KANTRA0A1W2PQU2 76 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 SOX1O00570 391 aaPredicted RBP13.83□□□□□ -0.2
CNOT9-208ENST00000542068 FOXS1O43638 330 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 WISP1O95388 367 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 F12P00748 615 aaPredicted RBP13.83□□□□□ -0.2
CNOT9-208ENST00000542068 CT45A8P0DMV1 189 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 CT45A9P0DMV2 189 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 MST1P26927 711 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 OR7A5Q15622 319 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 STK11Q15831 433 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF74Q16587 644 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 CT45A2Q5DJT8 189 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 SLC35D3Q5M8T2 416 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 KIAA0895LQ68EN5 471 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 ZCCHC12Q6PEW1 402 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 TFAP2EQ6VUC0 442 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 EID2Q8N6I1 236 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 GPBAR1Q8TDU6 330 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 ZNF578Q96N58 590 aaPredicted RBP13.83□□□□□ -0.2
CNOT9-208ENST00000542068 PCDHB16Q9NRJ7 776 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 TAS2R4Q9NYW5 299 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 MMP17Q9ULZ9 603 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 TRAV14DV4A0A0A6YYC5 116 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 F5H0A9 414 aaPredicted RBP13.83□□□□□ -0.2
CNOT9-208ENST00000542068 ARPC3O15145 178 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 SLC25A12O75746 678 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 MPZL1O95297 269 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 PNPP00491 289 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 HLA-AP01891 365 aaKnown RBP13.83□□□□□ -0.2
CNOT9-208ENST00000542068 TACR3P29371 465 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 DHODHQ02127 395 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 IKZF1Q13422 519 aa13.83□□□□□ -0.2
CNOT9-208ENST00000542068 NR0B2Q15466 257 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms