RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SMURF2Q9HAU4 748 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 CCNB1IP1Q9NPC3 277 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 MMP26Q9NRE1 261 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 CCDC167Q9P0B6 97 aa22.64■■□□□ 1.21
CHFR-218ENST00000540963 M0R3H8 397 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 LYPD3O95274 346 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 MPV17P39210 176 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 WNT5AP41221 380 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 TMEM255AQ5JRV8 349 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 NANOGNBQ7Z5D8 188 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 KLHL36Q8N4N3 616 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 OR6T1Q8NGN1 323 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 SLC25A40Q8TBP6 338 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 ADAMTS16Q8TE57 1224 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 SPDL1Q96EA4 605 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 DUX5Q96PT3 197 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 PATZ1Q9HBE1 687 aaKnown RBP22.63■■□□□ 1.21
CHFR-218ENST00000540963 INSIG2Q9Y5U4 225 aa22.63■■□□□ 1.21
CHFR-218ENST00000540963 A0A1W2PRG6 482 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 TRAPPC13A5PLN9 417 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 A8MXK9 166 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 POLR3GO15318 223 aaPredicted RBP22.62■■□□□ 1.21
CHFR-218ENST00000540963 GDI2P50395 445 aaKnown RBP22.62■■□□□ 1.21
CHFR-218ENST00000540963 DUSP7Q16829 419 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 DLEU7Q6UYE1 221 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 ZER1Q7Z7L7 766 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 SMYD1Q8NB12 490 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 C1QTNF5Q9BXJ0 243 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 OR2J1Q9GZK6 312 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 PCDHAC1Q9H158 963 aa22.62■■□□□ 1.21
CHFR-218ENST00000540963 C5orf49A4QMS7 147 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 CPSF4LA6NMK7 179 aaKnown RBP22.61■■□□□ 1.21
CHFR-218ENST00000540963 MCIDASD6RGH6 385 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 TRAPPC2LH3BP13 241 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 THY1P04216 161 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 PPIAL4GP0DN37 164 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 UMPSP11172 480 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 ACADSP16219 412 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 ZNF32P17041 273 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 SLC6A9P48067 706 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 DAP3P51398 398 aaKnown RBP22.61■■□□□ 1.21
CHFR-218ENST00000540963 NPTX1Q15818 432 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 MIDNQ504T8 468 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 SPATA46Q5T0L3 261 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 ASB10Q8WXI3 467 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 ZNF48Q96MX3 618 aaPredicted RBP22.61■■□□□ 1.21
CHFR-218ENST00000540963 SLC7A7Q9UM01 511 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 VWFP04275 2813 aa22.61■■□□□ 1.21
CHFR-218ENST00000540963 LOC100509620A0A075B734 347 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 GMNCA6NCL1 334 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 BLOC1S5-TXNDC5H3BN57 136 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 TRMUO75648 421 aaKnown RBP22.6■■□□□ 1.21
CHFR-218ENST00000540963 SBK2P0C263 348 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 NR2C1P13056 603 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 MTNR1AP48039 350 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 AGKQ53H12 422 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 C9orf139Q6ZV77 190 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 ZNF771Q7L3S4 317 aaPredicted RBP22.6■■□□□ 1.21
CHFR-218ENST00000540963 BCL6BQ8N143 479 aaPredicted RBP22.6■■□□□ 1.21
CHFR-218ENST00000540963 ZNF283Q8N7M2 679 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 C11orf65Q8NCR3 313 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 GPR32P1Q8NGA4 272 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 GEMIN6Q8WXD5 167 aaKnown RBP22.6■■□□□ 1.21
CHFR-218ENST00000540963 NABP1Q96AH0 204 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 NPHS2Q9NP85 383 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 TMEM106BQ9NUM4 274 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 MMP24Q9Y5R2 645 aa22.6■■□□□ 1.21
CHFR-218ENST00000540963 NPIPB13A6NJU9 1138 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 NPIPB4C9JG80 1138 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 CPT2P23786 658 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 UGT2B15P54855 530 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 PPP1CBP62140 327 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 RPL18Q07020 188 aaKnown RBP22.59■■□□□ 1.21
CHFR-218ENST00000540963 SLC9A3R2Q15599 337 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 FAM27BQ5VT28 67 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 LRRC28Q86X40 367 aaPredicted RBP22.59■■□□□ 1.21
CHFR-218ENST00000540963 ALDH16A1Q8IZ83 802 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 THOC1Q96FV9 657 aaKnown RBP22.59■■□□□ 1.21
CHFR-218ENST00000540963 MS4A7Q9GZW8 240 aaPredicted RBP22.59■■□□□ 1.21
CHFR-218ENST00000540963 ELOVL3Q9HB03 270 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 EGFL7Q9UHF1 273 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 UGT2A1Q9Y4X1 527 aa22.59■■□□□ 1.21
CHFR-218ENST00000540963 KPNA4O00629 521 aaPredicted RBP22.58■■□□□ 1.21
CHFR-218ENST00000540963 IGF2P01344 180 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 TNFRSF1AP19438 455 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 TNFAIP6P98066 277 aaPredicted RBP22.58■■□□□ 1.21
CHFR-218ENST00000540963 PSG4Q00888 419 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 CDK5R2Q13319 367 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 MTX3Q5HYI7 312 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 LEG1Q6P5S2 330 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 NMD3Q96D46 503 aaKnown RBP22.58■■□□□ 1.21
CHFR-218ENST00000540963 SAMD8Q96LT4 415 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.58■■□□□ 1.21
CHFR-218ENST00000540963 IL20RAQ9UHF4 553 aa22.58■■□□□ 1.21
CHFR-218ENST00000540963 F5H0A9 414 aaPredicted RBP22.57■■□□□ 1.2
CHFR-218ENST00000540963 M0QX08 132 aa22.57■■□□□ 1.2
CHFR-218ENST00000540963 F13BP05160 661 aa22.57■■□□□ 1.2
CHFR-218ENST00000540963 TUBG1P23258 451 aa22.57■■□□□ 1.2
CHFR-218ENST00000540963 TNFSF4P23510 183 aa22.57■■□□□ 1.2
CHFR-218ENST00000540963 ARHGDIAP52565 204 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms