RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PEG10Q86TG7 708 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ADCK1Q86TW2 530 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 NRMQ8IXM6 262 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 LRRC18Q8N456 261 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 LINC01356Q8N9X3 169 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 NPEPL1Q8NDH3 523 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 HTRA1Q92743 480 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF75AQ96N20 296 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF347Q96SE7 839 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 MRPL37Q9BZE1 423 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 BPESC1Q9GZL8 116 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 SEC61A2Q9H9S3 476 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 HINT3Q9NQE9 182 aaKnown RBP8.94□□□□□ -0.98
CDCA3-208ENST00000540683 CMTM6Q9NX76 183 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ADA2Q9NZK5 511 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF224Q9NZL3 707 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ABCD2Q9UBJ2 740 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 AURKCQ9UQB9 309 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 ENPP4Q9Y6X5 453 aa8.94□□□□□ -0.98
CDCA3-208ENST00000540683 RTTNQ86VV8 2226 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TMEM129A0AVI4 362 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF503-AS2A6NEH8 195 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 NME4O00746 187 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TPD52L2O43399 206 aaKnown RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 GPRIN2O60269 458 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 SHOX2O60902 331 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 NDUFB2O95178 105 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 CD14P08571 375 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TNFRSF1BP20333 461 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 GSTM3P21266 225 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TNFSF4P23510 183 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 APEX1P27695 318 aaKnown RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 CRABP1P29762 137 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 GSK3BP49841 420 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 PSME3P61289 254 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TOP3AQ13472 1001 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 RIN1Q13671 783 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 LAPTM4AQ15012 233 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 PABPC1L2AQ5JQF8 200 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 C16orf89Q6UX73 402 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 MYPOPQ86VE0 399 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TREML1Q86YW5 311 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 LINC00471Q8N535 108 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ARIH2OSQ8N7S6 290 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 OR1J1Q8NGS3 322 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 RAB39BQ96DA2 213 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF570Q96NI8 536 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 LRRC37BQ96QE4 947 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ELAC2Q9BQ52 826 aaKnown RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 SYT3Q9BQG1 590 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 GORASP2Q9H8Y8 452 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 NMNAT1Q9HAN9 279 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TAAR3PQ9P1P4 343 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ZDHHC8Q9ULC8 765 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 TMCC3Q9ULS5 477 aa8.93□□□□□ -0.98
CDCA3-208ENST00000540683 ATRQ13535 2644 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 IGLV3-9A0A075B6K5 115 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 C5orf49A4QMS7 147 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 C17orf100A8MU93 164 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 SURF4O15260 269 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 IGHV3-13P01766 116 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 HSD17B1P14061 328 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 CCNOP22674 350 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 SDHAP31040 664 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 RGS6P49758 472 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 DVL1P1P54792 670 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 MYBPC1Q00872 1141 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 HFEQ30201 348 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 MTX3Q5HYI7 312 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 FGD3Q5JSP0 725 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 GLYATQ6IB77 296 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 C8orf82Q6P1X6 216 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 CXXC5Q7LFL8 322 aaKnown RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 VTCN1Q7Z7D3 282 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 GLCCI1Q86VQ1 547 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 TSPYL5Q86VY4 417 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 PRIMA1Q86XR5 153 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF584Q8IVC4 421 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ICA1LQ8NDH6 482 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 OR5L1Q8NGL2 311 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 OR51A7Q8NH64 312 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 MOSPD2Q8NHP6 518 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 NSMAFQ92636 917 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 HDAC2Q92769 488 aaKnown RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 RAB1CQ92928 201 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 MSI2Q96DH6 328 aaKnown RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ELMOD3Q96FG2 381 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 DCAF13Q9NV06 445 aaKnown RBP8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ATPIF1Q9UII2 106 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 ARL2BPQ9Y2Y0 163 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
CDCA3-208ENST00000540683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.91□□□□□ -0.989e-7■■■□□ 17.4
CDCA3-208ENST00000540683 TRAV27A0A087WT01 109 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 A0A087WUU8 490 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 IGHV4-61A0A0C4DH41 118 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 A0A1W2PPL8 197 aa8.91□□□□□ -0.98
CDCA3-208ENST00000540683 PRSS37A4D1T9 235 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms