RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 UGT2A3Q6UWM9 527 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 TMEM179BQ7Z7N9 219 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 CIARTQ8N365 385 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 LINC00471Q8N535 108 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 AQP11Q8NBQ7 271 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 CPEB3Q8NE35 698 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 OR8D4Q8NGM9 314 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 SLCO4A1Q96BD0 722 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 TSSK2Q96PF2 358 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 IFT27Q9BW83 186 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 PLA2G12AQ9BZM1 189 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 ZNF442Q9H7R0 627 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 EMC7Q9NPA0 242 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 POLE4Q9NR33 117 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 FBXL3Q9UKT7 428 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 DCTN6O00399 190 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 ARPC3O15145 178 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC16A7O60669 478 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 HIST1H1CP16403 213 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 APEX1P27695 318 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 ADCK1Q86TW2 530 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC30A7Q8NEW0 376 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 AKR7LQ8NHP1 331 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 ZNF416Q9BWM5 594 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 NUAK2Q9H093 628 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 RERGLQ9H628 205 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 COA3Q9Y2R0 106 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 ACANP16112 2415 aa15.79■□□□□ 0.12
SNRPA1-203ENST00000540017 FLNAP21333 2647 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 ARFGEF3Q5TH69 2177 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 TMEM129A0AVI4 362 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 H7C417 338 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 ATP5HO75947 161 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 MPZL1O95297 269 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 GPANK1O95872 356 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 TP53P04637 393 aaPredicted RBP15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 CST2P09228 141 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 MSR1P21757 451 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 PSG4Q00888 419 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 CLEC12AQ5QGZ9 265 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 RASSF6Q6ZTQ3 369 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 PAPD5Q8NDF8 572 aaKnown RBP15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 OR4K13Q8NH42 304 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 NMNAT3Q96T66 252 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 OR2H1Q9GZK4 316 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 WNT5BQ9H1J7 359 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 KCNN2Q9H2S1 579 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 CCNB1IP1Q9NPC3 277 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 IL20Q9NYY1 176 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 CDH10Q9Y6N8 788 aa15.78■□□□□ 0.12
SNRPA1-203ENST00000540017 BHLHE40O14503 412 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 FKBP6O75344 327 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 KHDRBS3O75525 346 aaKnown RBP15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 RASSF2P50749 326 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 HSF2Q03933 536 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 EFNB3Q15768 340 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC35F1Q5T1Q4 408 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 LEG1Q6P5S2 330 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 DNM1P46Q6ZS02 220 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 OR10G2Q8NGC3 310 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 NIPSNAP1Q9BPW8 284 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 DGCR6LQ9BY27 220 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 LRMDAQ9H2I8 198 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 PLK3Q9H4B4 646 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 RTTNQ86VV8 2226 aa15.77■□□□□ 0.12
SNRPA1-203ENST00000540017 LOC100509620A0A075B734 347 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 IGLV1-36A0A0B4J1U3 117 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 IQCMA0A1B0GVH7 501 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 B9A039 149 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 H7C1Q1 480 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SOX14O95416 240 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 FAM157BP0CG42 384 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 GUCA1AP43080 201 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 CBX1P83916 185 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 GALK2Q01415 458 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 PLP2Q04941 152 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 TNK1Q13470 666 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 CLEC12BQ2HXU8 276 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 ZNF362Q5T0B9 420 aaPredicted RBP15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 GLB1L2Q8IW92 636 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 HS3ST5Q8IZT8 346 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 OR6V1Q8N148 313 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SVOPLQ8N434 492 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SDR9C7Q8NEX9 313 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 GIPC3Q8TF64 312 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 POM121L2Q96KW2 1035 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 FEVQ99581 238 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 DOK1Q99704 481 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SMR3AQ99954 134 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 OR51B6Q9H340 312 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 FN3KQ9H479 309 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SRA1Q9HD15 236 aaKnown RBP15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 FZR1Q9UM11 496 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 SPEF1Q9Y4P9 236 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 TIMM10BQ9Y5J6 103 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 PMF1-BGLAPU3KQ54 211 aa15.76■□□□□ 0.11
SNRPA1-203ENST00000540017 OR6C68A6NDL8 312 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 IDH3BO43837 385 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 SSX4O60224 188 aa15.75■□□□□ 0.11
SNRPA1-203ENST00000540017 LY6HO94772 140 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms