RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF761Q86XN6 746 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 BEST3Q8N1M1 668 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 RELL2Q8NC24 303 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 STEAP2Q8NFT2 490 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 ATOH1Q92858 354 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 FBXW5Q969U6 566 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 MRGPRX1Q96LB2 322 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 ELF4Q99607 663 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 TCEAL2Q9H3H9 227 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
CDH13-204ENST00000539548 GMEB2Q9UKD1 530 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 DHDHQ9UQ10 334 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 SLC22A13Q9Y226 551 aa8.72□□□□□ -1.01
CDH13-204ENST00000539548 OR5H14A6NHG9 310 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 MPTX1A8MV57 137 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 DNASE2O00115 360 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 XKRYO14609 159 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 PRKNO60260 465 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 OR2F2O95006 317 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 FCER2P06734 321 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ICAM2P13598 275 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 IGFBP3P17936 291 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 FSTP19883 344 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 SLC6A8P48029 635 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 OR2F1Q13607 317 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 SERTAD2Q14140 314 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ATPAF1Q5TC12 328 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 SLC18B1Q6NT16 456 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 JMJD6Q6NYC1 403 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 ATRAIDQ6UW56 229 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ZNF627Q7L945 461 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 CATSPERDQ86XM0 798 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 GALNT16Q8N428 558 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 AVL9Q8NBF6 648 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 OR5M8Q8NGP6 311 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 OR10K1Q8NGX5 313 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ZNF563Q8TA94 476 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ASB5Q8WWX0 329 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 C8orf44Q96CB5 159 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ZNF587Q96SQ5 575 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 S1PR5Q9H228 398 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 BARX1Q9HBU1 254 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 PRMT8Q9NR22 394 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 CKLFQ9UBR5 152 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 TNFSF18Q9UNG2 199 aa8.71□□□□□ -1.01
CDH13-204ENST00000539548 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.01
CDH13-204ENST00000539548 TMEM131Q92545 1883 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.02
CDH13-204ENST00000539548 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 CHD7Q9P2D1 2997 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 TRAV36DV7A0A075B6V5 113 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 PRSS37A4D1T9 235 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 TMEM200CA6NKL6 621 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 M0QYG6 137 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 LDLRAD4O15165 306 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 NUPL2O15504 423 aaKnown RBP8.71□□□□□ -1.02
CDH13-204ENST00000539548 HLA-DQA2P01906 255 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 APOC3P02656 99 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 AMY2AP04746 511 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 CD2P06729 351 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 HLA-GP17693 338 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 ACHEP22303 614 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 PBX2P40425 430 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 NR0B2Q15466 257 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 ETFDHQ16134 617 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 GLYATL3Q5SZD4 288 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 KCTD18Q6PI47 426 aaPredicted RBP8.71□□□□□ -1.02
CDH13-204ENST00000539548 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 PLPP7Q8NBV4 271 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 OR13H1Q8NG92 308 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 PPP1R14AQ96A00 147 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 TINAGL1Q9GZM7 467 aaPredicted RBP8.71□□□□□ -1.02
CDH13-204ENST00000539548 MRPL22Q9NWU5 206 aaKnown RBP8.71□□□□□ -1.02
CDH13-204ENST00000539548 HRH3Q9Y5N1 445 aa8.71□□□□□ -1.02
CDH13-204ENST00000539548 CACNA1IQ9P0X4 2223 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 IGLV1-36A0A0B4J1U3 117 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 KANTRA0A1W2PQU2 76 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 C17orf105B2RV13 164 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 ZNF736B4DX44 427 aaPredicted RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 OR6A2O95222 327 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 CYB5AP00167 134 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 CA3P07451 260 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 CXCR1P25024 350 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 RABIFP47224 123 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 SLC37A1P57057 533 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 RPL27P61353 136 aaKnown RBP8.7□□□□□ -1.02
CDH13-204ENST00000539548 HHEXQ03014 270 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 TFF2Q03403 129 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 DHRS2Q13268 280 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 ZMYND11Q15326 602 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 LIN54Q6MZP7 749 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 C11orf87Q6NUJ2 197 aa8.7□□□□□ -1.02
CDH13-204ENST00000539548 SLC35D2Q76EJ3 337 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms