RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 VCX3AQ9NNX9 186 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 FGF20Q9NP95 211 aaPredicted RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 SLC7A10Q9NS82 523 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 CHCHD3Q9NX63 227 aaKnown RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 HAO2Q9NYQ3 351 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 DIMT1Q9UNQ2 313 aaKnown RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 ZNF835Q9Y2P0 537 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
CD4-208ENST00000538827 POLQO75417 2590 aa12.48□□□□□ -0.41
CD4-208ENST00000538827 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 C12orf71A8MTZ7 269 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 ADRA2AP08913 450 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 LAP3P28838 519 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 C21orf33P30042 268 aaPredicted RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 GUCA1AP43080 201 aaPredicted RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 OR3A2P47893 321 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 ENTPD1P49961 510 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 FAPQ12884 760 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 FOXF2Q12947 444 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 NEDD8Q15843 81 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 SGCAQ16586 387 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 EIF2S3LQ2VIR3 472 aaKnown RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 NCCRP1Q6ZVX7 275 aaPredicted RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 LINGO2Q7L985 606 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 PRSS48Q7RTY5 328 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 SLC26A10Q8NG04 563 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 C11orf40Q8WZ69 217 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 WDR76Q9H967 626 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 MRPL22Q9NWU5 206 aaKnown RBP12.47□□□□□ -0.41
CD4-208ENST00000538827 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 OSGIN2Q9Y236 505 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 PCDHGB1Q9Y5G3 927 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 ITPR3Q14573 2671 aa12.47□□□□□ -0.41
CD4-208ENST00000538827 TRIM64A6NGJ6 449 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 ZNF670-ZNF695F2Z2N8 137 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
CD4-208ENST00000538827 GLI4P10075 376 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 PSKH1P11801 424 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 MSR1P21757 451 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 DCKP27707 260 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.41
CD4-208ENST00000538827 HCCSP53701 268 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 HSF2Q03933 536 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 GUSBP1Q15486 140 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 TFAP2EQ6VUC0 442 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 KCTD8Q6ZWB6 473 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 ABHD12BQ7Z5M8 362 aaPredicted RBP12.46□□□□□ -0.41
CD4-208ENST00000538827 LHFPL3Q86UP9 236 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 LINC00346Q8IVM7 164 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 TIGD4Q8IY51 512 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 SPARTQ8N0X7 666 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 RFLNBQ8N5W9 214 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 NAXEQ8NCW5 288 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 FOXB1Q99853 325 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 TTYH2Q9BSA4 534 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 POLE4Q9NR33 117 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 KCNG2Q9UJ96 466 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 COPS3Q9UNS2 423 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 UGT2A1Q9Y4X1 527 aa12.46□□□□□ -0.41
CD4-208ENST00000538827 FREM1Q5H8C1 2179 aa12.46□□□□□ -0.42
CD4-208ENST00000538827 RP1L1Q8IWN7 2480 aaPredicted RBP12.46□□□□□ -0.42
CD4-208ENST00000538827 TOXO94900 526 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 CLPTM1O96005 669 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 IGHA1P01876 353 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 B4GALT1P15291 398 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 TIMP3P35625 211 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ETV1P50549 477 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
CD4-208ENST00000538827 PMPCAQ10713 525 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 MRPL49Q13405 166 aaKnown RBP12.45□□□□□ -0.42
CD4-208ENST00000538827 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
CD4-208ENST00000538827 RIPPLY2Q5TAB7 128 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ZNF813Q6ZN06 617 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 BTLAQ7Z6A9 289 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 CDC20BQ86Y33 519 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 KLHL36Q8N4N3 616 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ACBD7Q8N6N7 88 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ZNF837Q96EG3 531 aaPredicted RBP12.45□□□□□ -0.42
CD4-208ENST00000538827 SIGLEC11Q96RL6 698 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ALG8Q9BVK2 526 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 MND1Q9BWT6 205 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 CDADC1Q9BWV3 514 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
CD4-208ENST00000538827 MARCH7Q9H992 704 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 CLEC2DQ9UHP7 191 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 LAMP5Q9UJQ1 280 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 KLHDC2Q9Y2U9 406 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 CELSR2Q9HCU4 2923 aa12.45□□□□□ -0.42
CD4-208ENST00000538827 INTS1Q8N201 2190 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms