RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 OSBPL10Q9BXB5 764 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 RSPO3Q9BXY4 272 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-208ENST00000538266 POTEKPQ9BYX7 375 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 SLC19A3Q9BZV2 496 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 NDEL1Q9GZM8 345 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 GABARAPL1Q9H0R8 117 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 ANKRD19PQ9H560 264 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 REEP1Q9H902 201 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 CALHM2Q9HA72 323 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 CCNB1IP1Q9NPC3 277 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 FAM118AQ9NWS6 357 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 EMC3Q9P0I2 261 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 TMCC3Q9ULS5 477 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF835Q9Y2P0 537 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 MED31Q9Y3C7 131 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 SAMHD1Q9Y3Z3 626 aaKnown RBP3.83□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF175Q9Y473 711 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 SVILO95425 2214 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 FAM208BQ5VWN6 2430 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 ATRXP46100 2492 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 WDFY3Q8IZQ1 3526 aa3.83□□□□□ -1.8
SNHG1-208ENST00000538266 MGAQ8IWI9 3026 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PIEZO2Q9H5I5 2752 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 KMT2BQ9UMN6 2715 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 TLN1Q9Y490 2541 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 DNAJC13O75165 2243 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF407Q9C0G0 2248 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SHANK1Q9Y566 2161 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 FREM3P0C091 2139 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 IGKV1D-42A0A075B6H8 117 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 A0A0J9YW62 118 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 LOC102723971A0A1B0GUV8 181 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 ISPDA4D126 451 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 LIPT2A6NK58 231 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 HSPB2A8KAH6 182 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 J3KTA2 159 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RAB27BO00194 218 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 TNFRSF11BO00300 401 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 FFAR1O14842 300 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 LRRTM2O43300 516 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RGS10O43665 173 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 EFNA2O43921 213 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR10H3O60404 316 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 DIRAS1O95057 198 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 AKR7A3O95154 331 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR6A2O95222 327 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PMS2P2O95744 297 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CH25HO95992 272 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CST1P01037 141 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 MT-ND5P03915 603 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SEMG1P04279 462 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 HTR1AP08908 422 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SAGP10523 405 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PLA2G2AP14555 144 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 S100A1P23297 94 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 IGFBP5P24593 272 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RRM2P31350 389 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 MAGEA2P43356 314 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 ARHGDIAP52565 204 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SMSP52788 366 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SUCLG1P53597 346 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CTBP2P56545 445 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PPP2R2BQ00005 443 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CD47Q08722 323 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PMPCAQ10713 525 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 AQP6Q13520 282 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 C1DQ13901 141 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RNPS1Q15287 305 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 HSPB2Q16082 182 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 ZNF239Q16600 458 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CTF1Q16619 201 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CTU2Q2VPK5 515 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PLAC9Q5JTB6 97 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 NSUN5P2Q63ZY6 315 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 TMEM225Q6GV28 225 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR2T5Q6IEZ7 315 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 TBPL2Q6SJ96 375 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PAQR6Q6TCH4 344 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 FCRLAQ7L513 359 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PIWIL3Q7Z3Z3 882 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 NANOGNBQ7Z5D8 188 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 KCTD20Q7Z5Y7 419 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 PEG10Q86TG7 708 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 GPAT4Q86UL3 456 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 AKAP14Q86UN6 197 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 FJX1Q86VR8 437 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 P2RY8Q86VZ1 359 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 P3H2Q8IVL5 708 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 NRMQ8IXM6 262 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RNF113BQ8IZP6 322 aaKnown RBP3.82□□□□□ -1.8
SNHG1-208ENST00000538266 GCNT2Q8N0V5 402 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 SLC43A2Q8N370 569 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 CNEP1R1Q8N9A8 125 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR4K5Q8NGD3 323 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR6Q1Q8NGQ2 317 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 OR2T29Q8NH02 315 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 MFSD8Q8NHS3 518 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 FNDC9Q8TBE3 224 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 RNF128Q8TEB7 428 aa3.82□□□□□ -1.8
SNHG1-208ENST00000538266 ABHD3Q8WU67 409 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms