RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 MMP16P51512 607 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 PKNOX1P55347 436 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 KCNJ10P78508 379 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 ATAD3BQ5T9A4 648 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 CD276Q5ZPR3 534 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 C1orf122Q6ZSJ8 110 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 ZNF627Q7L945 461 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 STMN2Q93045 179 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 ZNF837Q96EG3 531 aaPredicted RBP7.61□□□□□ -1.19
USP28-205ENST00000537706 METTL2AQ96IZ6 378 aaKnown RBP7.61□□□□□ -1.19
USP28-205ENST00000537706 SAMD8Q96LT4 415 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 FOXB1Q99853 325 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 ULBP2Q9BZM5 246 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 RAB18Q9NP72 206 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 POLE3Q9NRF9 147 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 ZNF225Q9UK10 706 aa7.61□□□□□ -1.19
USP28-205ENST00000537706 A0A096LPI6 279 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZNF879B4DU55 563 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 SEC22BO75396 215 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 CRCPO75575 148 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 MFN2O95140 757 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 AGR2O95994 175 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 APLNRP35414 380 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 RPL3P39023 403 aaKnown RBP7.6□□□□□ -1.19
USP28-205ENST00000537706 P2RY4P51582 365 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 KRTAP10-11P60412 298 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 GNA13Q14344 377 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 MFSD13AQ14CX5 517 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 UNC50Q53HI1 259 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZNF385BQ569K4 471 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 CARD17Q5XLA6 110 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 OR6N1Q8NGY5 312 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 RP9Q8TA86 221 aaKnown RBP7.6□□□□□ -1.19
USP28-205ENST00000537706 NSMAFQ92636 917 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 MTERF3Q96E29 417 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 LRR1Q96L50 414 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 OR2M2Q96R28 347 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 THTPAQ9BU02 230 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 RANBP3Q9H6Z4 567 aaPredicted RBP7.6□□□□□ -1.19
USP28-205ENST00000537706 NDE1Q9NXR1 346 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 PPP1R3CQ9UQK1 317 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZSCAN5BA6NJL1 495 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 FAAHO00519 579 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ANGPTL7O43827 346 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 TFPTP0C1Z6 253 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 MMP15P51511 669 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ACTR3P61158 418 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 HPCAP84074 193 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 EGFEM1PQ0D2K5 195 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 RCN1Q15293 331 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 C1orf146Q5VVC0 180 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 C1orf140Q5VVS0 124 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 KANK2Q63ZY3 851 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 NXNQ6DKJ4 435 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZNF774Q6NX45 483 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 C20orf196Q8IYI0 205 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 NATD1Q8N6N6 113 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 NPRL2Q8WTW4 380 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 OR5P2Q8WZ92 322 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 LHX4Q969G2 390 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 DACT3Q96B18 629 aaPredicted RBP7.6□□□□□ -1.19
USP28-205ENST00000537706 SLC25A36Q96CQ1 311 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 EGLN2Q96KS0 407 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 PPP1R36Q96LQ0 422 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 CHID1Q9BWS9 393 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZNF350Q9GZX5 532 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 TNFRSF12AQ9NP84 129 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 GPATCH2Q9NW75 528 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 DCAF16Q9NXF7 216 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 KCNE5Q9UJ90 142 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 PRPF19Q9UMS4 504 aaKnown RBP7.6□□□□□ -1.19
USP28-205ENST00000537706 WDR45Q9Y484 360 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 TIMM22Q9Y584 194 aa7.6□□□□□ -1.19
USP28-205ENST00000537706 ZNF726A6NNF4 738 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 PHYHO14832 338 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 AIM2O14862 343 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 PEX14O75381 377 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 KRT36O76013 467 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 ANP32DO95626 131 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 PAHP00439 452 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 GUSBP08236 651 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 EFNA1P20827 205 aaPredicted RBP7.59□□□□□ -1.19
USP28-205ENST00000537706 MATN1P21941 496 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 HPCAL1P37235 193 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 CRATP43155 626 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 COPZ1P61923 177 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 CYLC2Q14093 348 aaPredicted RBP7.59□□□□□ -1.19
USP28-205ENST00000537706 MAPRE2Q15555 327 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 PGM2L1Q6PCE3 622 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 C16orf89Q6UX73 402 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 UNQ9370/PRO34162Q6UXP9 181 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 UEVLDQ8IX04 471 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 ZNF440Q8IYI8 595 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 PNLDC1Q8NA58 520 aaKnown RBP7.59□□□□□ -1.19
USP28-205ENST00000537706 OR5D16Q8NGK9 328 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 MFSD8Q8NHS3 518 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 WDFY2Q96P53 400 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 CCT7Q99832 543 aa7.59□□□□□ -1.19
USP28-205ENST00000537706 ZNRD1Q9P1U0 126 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms