RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 WWTR1Q9GZV5 400 aa12.89□□□□□ -0.35
USP44-203ENST00000537435 OPN4Q9UHM6 478 aa12.89□□□□□ -0.35
USP44-203ENST00000537435 NUP50Q9UKX7 468 aa12.89□□□□□ -0.35
USP44-203ENST00000537435 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 DXOO77932 396 aaKnown RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 ZNF35P13682 527 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 ABCD3P28288 659 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 RIDAP52758 137 aaKnown RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 ROM1Q03395 351 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 C1orf140Q5VVS0 124 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 TMEM225Q6GV28 225 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 OR2AK2Q8NG84 335 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 DAZLQ92904 295 aaKnown RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 PNPLA2Q96AD5 504 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 ABHD6Q9BV23 337 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 OR11A1Q9GZK7 315 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SLC2A4RGQ9NR83 387 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 TAS2R4Q9NYW5 299 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 KCNN3Q9UGI6 736 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 A0A1W2PR77 199 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SLC22A23A1A5C7 686 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 B8ZZF3 427 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 GOSR2O14653 212 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 TO15178 435 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 ARPC5O15511 151 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SDC3O75056 442 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
USP44-203ENST00000537435 RIPPLY1Q0D2K3 151 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 STEAP1BQ6NZ63 245 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SLC38A6Q8IZM9 456 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 CLEC1AQ8NC01 280 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 MVB12AQ96EY5 273 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 GAL3ST1Q99999 423 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 SLC17A5Q9NRA2 495 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 RDH8Q9NYR8 311 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 COPS7AQ9UBW8 275 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 KIF25Q9UIL4 384 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 LRP12Q9Y561 859 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
USP44-203ENST00000537435 OR6C65A6NJZ3 312 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 A8MVM7 634 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 PLPP3O14495 311 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SEC16AO15027 2179 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 MPZL1O95297 269 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 ARL4DP49703 201 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SFRP5Q5T4F7 317 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SYT13Q7L8C5 426 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SLC29A4Q7RTT9 530 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 GPX8Q8TED1 209 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SLC25A28Q96A46 364 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 CHST6Q9GZX3 395 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 APMAPQ9HDC9 416 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 COA3Q9Y2R0 106 aaPredicted RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 F5H5P2 479 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 DOK2O60496 412 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 SNAPC5O75971 98 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 CD2P06729 351 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 GLULP15104 373 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 FBLP22087 321 aaKnown RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 CD27P26842 260 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 S100A11P31949 105 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 HLXQ14774 488 aaPredicted RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 HYAL4Q2M3T9 481 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 TMEM65Q6PI78 240 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 GRINAQ7Z429 371 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 HDDC2Q7Z4H3 204 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 KDM8Q8N371 416 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 OR1N1Q8NGS0 311 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 GPR119Q8TDV5 335 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 RBPMSQ93062 196 aaKnown RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 RAB33BQ9H082 229 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 EXO5Q9H790 373 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 CKLFQ9UBR5 152 aa12.87□□□□□ -0.35
USP44-203ENST00000537435 CGGBP1Q9UFW8 167 aaPredicted RBP12.87□□□□□ -0.35
USP44-203ENST00000537435 FXYD6-FXYD2A0A087WZ82 144 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 AHSA1O95433 338 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 HLA-DOBP13765 273 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 HTR2CP28335 458 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 MAP2K6P52564 334 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 HSD11B2P80365 405 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 GLYATL3Q5SZD4 288 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms