RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CDAP32320 146 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 GRK5P34947 590 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 GIPRP48546 466 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 PTDSS1P48651 473 aaKnown RBP11.78□□□□□ -0.52
RPAIN-205ENST00000536255 PCBD1P61457 104 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 RAB1AP62820 205 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 GLO1Q04760 184 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 NPRL3Q12980 569 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 GINS1Q14691 196 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 ZNF672Q499Z4 452 aaPredicted RBP11.78□□□□□ -0.52
RPAIN-205ENST00000536255 FAM27BQ5VT28 67 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 KDM4DQ6B0I6 523 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 FOXL2NBQ6ZUU3 175 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 MDP1Q86V88 176 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 GLB1L2Q8IW92 636 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 IL17RDQ8NFM7 739 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 NEUROG1Q92886 237 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 FBXW5Q969U6 566 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 SH3GL3Q99963 347 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 WACQ9BTA9 647 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 PRRG3Q9BZD7 231 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 RACGAP1Q9H0H5 632 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 CCNB1IP1Q9NPC3 277 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 RPRD1BQ9NQG5 326 aaKnown RBP11.78□□□□□ -0.52
RPAIN-205ENST00000536255 B3GNT2Q9NY97 397 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 ORC6Q9Y5N6 252 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 FKBP7Q9Y680 259 aa11.78□□□□□ -0.52
RPAIN-205ENST00000536255 SHISA9B4DS77 424 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 SMPD2O60906 423 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 BAG2O95816 211 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 PTHP01270 115 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 CRYAAP02489 173 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 CST2P09228 141 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 PAICSP22234 425 aaKnown RBP11.77□□□□□ -0.53
RPAIN-205ENST00000536255 CENPAP49450 140 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 IDH3GP51553 393 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-205ENST00000536255 CRISP1P54107 249 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 PLP2Q04941 152 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 PIGFQ07326 219 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 ETFDHQ16134 617 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 SLC22A25Q6T423 547 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 ZBTB46Q86UZ6 589 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 IQCF1Q8N6M8 205 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 SLC37A3Q8NCC5 494 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 OR2T4Q8NH00 348 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 NABP1Q96AH0 204 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 PLEKHA8Q96JA3 519 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 C9orf16Q9BUW7 83 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 C1orf198Q9H425 327 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
RPAIN-205ENST00000536255 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 CMC2Q9NRP2 79 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF224Q9NZL3 707 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
RPAIN-205ENST00000536255 HIVEP1P15822 2718 aa11.77□□□□□ -0.53
RPAIN-205ENST00000536255 IGHV1-18A0A0C4DH31 117 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 C12orf71A8MTZ7 269 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 ANKRD65E5RJM6 399 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 TMCC2O75069 709 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 CECR9P0C854 216 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 CDH11P55287 796 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 LSM6P62312 80 aaKnown RBP11.76□□□□□ -0.53
RPAIN-205ENST00000536255 PPP2R2BQ00005 443 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 CDK5Q00535 292 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 HSF2Q03933 536 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 SPOCK1Q08629 439 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 SYT9Q86SS6 491 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 OR6V1Q8N148 313 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 CYB561A3Q8NBI2 242 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 PROKR2Q8NFJ6 384 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 TSSK2Q96PF2 358 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 CIB1Q99828 191 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 SLC25A19Q9HC21 320 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 POLR1DQ9Y2S0 133 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 ROS1P08922 2347 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 F8P00451 2351 aa11.76□□□□□ -0.53
RPAIN-205ENST00000536255 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
RPAIN-205ENST00000536255 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 IQCMA0A1B0GVH7 501 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ZNF503-AS2A6NEH8 195 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 DCTN6O00399 190 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 HLA-DQA2P01906 255 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 SERPINA5P05154 406 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 DANCRP0C864 163 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 PATE4P0C8F1 98 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 BLVRAP53004 296 aa11.75□□□□□ -0.53
RPAIN-205ENST00000536255 SLC25A1P53007 311 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms