RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 R4GMQ9 66 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 LOC101059948A0A1B0GTJ6 334 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 TCEA1P23193 301 aaKnown RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 DNASE1L1P49184 302 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 AGFG1P52594 562 aaKnown RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 OR10A3P58181 314 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 RAC3P60763 192 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 FMODQ06828 376 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 BAK1Q16611 211 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 B3GNTL1Q67FW5 361 aaPredicted RBP11.95□□□□□ -0.5
BEST1-208ENST00000534553 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 CLEC1AQ8NC01 280 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 C19orf18Q8NEA5 215 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 RNF133Q8WVZ7 376 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 AMELYQ99218 206 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 OR2B2Q9GZK3 357 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 ZFP64Q9NPA5 681 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 B4GALT7Q9UBV7 327 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 LRP12Q9Y561 859 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 V9GY05 133 aa11.95□□□□□ -0.5
BEST1-208ENST00000534553 SDK2Q58EX2 2172 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 TRBV5-7A0A0A0MS05 114 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 A0A1W2PQ09 198 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 ACOD1A6NK06 481 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 IFITM5A6NNB3 132 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 NPIPA2E9PIF3 369 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 NPIPA3F8WFD2 350 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 PIN1P1O15428 100 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 CD2P06729 351 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 CSF3P09919 207 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 ELK1P19419 428 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 AZGP1P25311 298 aaKnown RBP11.94□□□□□ -0.5
BEST1-208ENST00000534553 CFPP27918 469 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 GUCA1AP43080 201 aaPredicted RBP11.94□□□□□ -0.5
BEST1-208ENST00000534553 PITPNBP48739 271 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 CD97P48960 835 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 PITPNAQ00169 270 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 KCNMB1Q16558 191 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 PYHIN1Q6K0P9 492 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
BEST1-208ENST00000534553 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 ESPNLQ6ZVH7 1005 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 CATSPERDQ86XM0 798 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.94□□□□□ -0.5
BEST1-208ENST00000534553 PRSS35Q8N3Z0 413 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 OR14L1PQ8NHC6 308 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 FAM173AQ9BQD7 235 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 UTP23Q9BRU9 249 aaKnown RBP11.94□□□□□ -0.5
BEST1-208ENST00000534553 EMC6Q9BV81 110 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 SLC22A4Q9H015 551 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 CYB5R1Q9UHQ9 305 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 TBC1D24Q9ULP9 559 aa11.94□□□□□ -0.5
BEST1-208ENST00000534553 TRABD2BA6NFA1 517 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ISG15P05161 165 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 UBCP0CG48 685 aaKnown RBP11.93□□□□□ -0.5
BEST1-208ENST00000534553 CALCBP10092 127 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 PSKH1P11801 424 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 MMP16P51512 607 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ZNF133P52736 654 aaPredicted RBP11.93□□□□□ -0.5
BEST1-208ENST00000534553 FOXK1P85037 733 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 CAMK2DQ13557 499 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 TOMM20Q15388 145 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 SLC25A35Q3KQZ1 300 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 STPG1Q5TH74 334 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ZNF671Q8TAW3 534 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 C11orf40Q8WZ69 217 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 HTRA1Q92743 480 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 MCHR2Q969V1 340 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 RELTQ969Z4 430 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 TMEM106AQ96A25 262 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 BRD7Q9NPI1 651 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
BEST1-208ENST00000534553 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 A0A1W2PPK0 400 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 LRRC3CA6NJW4 275 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 G3V3Y1 287 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 TPPPO94811 219 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 H2BFMP0C1H6 154 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ATF1P18846 271 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 ITGA3P26006 1051 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 INPP1P49441 399 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 B3GALT5-AS1P59052 145 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 PDSS1Q5T2R2 415 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 OR7E24Q6IFN5 339 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 KLHL24Q6TFL4 600 aa11.93□□□□□ -0.5
BEST1-208ENST00000534553 CCBE1Q6UXH8 406 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms