RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CPEB3Q8NE35 698 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 OR1J1Q8NGS3 322 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SYNPRQ8TBG9 265 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SNX33Q8WV41 574 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 C11orf40Q8WZ69 217 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NABP1Q96AH0 204 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NMD3Q96D46 503 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 MSI2Q96DH6 328 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NDEL1Q9GZM8 345 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SHARPINQ9H0F6 387 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 RERGLQ9H628 205 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NARFLQ9H6Q4 476 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SMURF2Q9HAU4 748 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 ABCD2Q9UBJ2 740 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 GRHPRQ9UBQ7 328 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 CDC42EP3Q9UKI2 254 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 ADAM18Q9Y3Q7 739 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 WNK2Q9Y3S1 2297 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 C5orf49A4QMS7 147 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 XKRYO14609 159 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 CDC42EP2O14613 210 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 TPD52L2O43399 206 aaKnown RBP8.95□□□□□ -0.98
CAPN1-225ENST00000533704 MGRN1O60291 552 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 NCR1O76036 304 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 PRSS23O95084 383 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 IGHMP01871 453 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 IGFBP5P24593 272 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 GIFP27352 417 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 IL2RGP31785 369 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 MSX2P35548 267 aaPredicted RBP8.95□□□□□ -0.98
CAPN1-225ENST00000533704 CHN2P52757 468 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 UCP2P55851 309 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 MXRA7P84157 204 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 PSG4Q00888 419 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 FHL1Q13642 323 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 ANKDD1AQ495B1 522 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 ZBED5Q49AG3 693 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 SPATA46Q5T0L3 261 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 TMEM154Q6P9G4 183 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 TSEN54Q7Z6J9 526 aaKnown RBP8.95□□□□□ -0.98
CAPN1-225ENST00000533704 FAM86B1Q8N7N1 296 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 OR52J3Q8NH60 311 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF519Q8TB69 540 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 FNDC8Q8TC99 324 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 SLC7A13Q8TCU3 470 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 RASD2Q96D21 266 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 Q96M85 177 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF570Q96NI8 536 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 BCL2L14Q9BZR8 327 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 EMC7Q9NPA0 242 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 EIF3KQ9UBQ5 218 aaKnown RBP8.95□□□□□ -0.98
CAPN1-225ENST00000533704 GPR160Q9UJ42 338 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 SAMD4AQ9UPU9 718 aaKnown RBP8.95□□□□□ -0.98
CAPN1-225ENST00000533704 AURKCQ9UQB9 309 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 TMEM5Q9Y2B1 443 aa8.95□□□□□ -0.98
CAPN1-225ENST00000533704 TEX13CA0A0J9YWL9 993 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 TRBV4-1A0A0J9YWV2 114 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 SOCS2O14508 198 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 CDC14BO60729 498 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 LILRA1O75019 489 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 SNAP29O95721 258 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 CD14P08571 375 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 FAM157CP0CG43 387 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 RHCEP18577 417 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 MSR1P21757 451 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 COL8A2P25067 703 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 GCH1P30793 250 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 MAGEB1P43366 347 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 GPR6P46095 362 aaPredicted RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 PCBD1P61457 104 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 SPIBQ01892 262 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 KRR1Q13601 381 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 TSTQ16762 297 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ELFN2Q5R3F8 820 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 FAM27BQ5VT28 67 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 OTPQ5XKR4 325 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF774Q6NX45 483 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 UGT2A3Q6UWM9 527 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 TMPRSS11FQ6ZWK6 438 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ALDH16A1Q8IZ83 802 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ABHD4Q8TB40 342 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 GTF3AQ92664 365 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 RDH5Q92781 318 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 RSRC1Q96IZ7 334 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 SOX7Q9BT81 388 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF416Q9BWM5 594 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 OR2H1Q9GZK4 316 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 WNT5BQ9H1J7 359 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ANKRD19PQ9H560 264 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 HINT3Q9NQE9 182 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 DCAF13Q9NV06 445 aaKnown RBP8.94□□□□□ -0.98
CAPN1-225ENST00000533704 ARL8BQ9NVJ2 186 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 SLCO1C1Q9NYB5 712 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 NDUFAF4Q9P032 175 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 LPAR3Q9UBY5 353 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 IL20RAQ9UHF4 553 aa8.94□□□□□ -0.98
CAPN1-225ENST00000533704 LOC100509620A0A075B734 347 aa8.93□□□□□ -0.98
CAPN1-225ENST00000533704 A0A1W2PRQ8 180 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms