RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ISL1P61371 349 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 LMO4P61968 165 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 TEKQ02763 1124 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 POU3F1Q03052 451 aaPredicted RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 MVKQ03426 396 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 CD47Q08722 323 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 FADDQ13158 208 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 MAD2L1BPQ15013 274 aaPredicted RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 CEACAM16Q2WEN9 425 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 ZIK1Q3SY52 487 aaPredicted RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 RPS26P11Q5JNZ5 115 aaPredicted RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 XAF1Q6GPH4 301 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 GLCCI1Q86VQ1 547 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 COMTD1Q86VU5 262 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 SLC30A8Q8IWU4 369 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 CADM2Q8N3J6 435 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 C11orf65Q8NCR3 313 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 TMEM186Q96B77 213 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 KTI12Q96EK9 354 aaPredicted RBP7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 EPYCQ99645 322 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 APOL4Q9BPW4 351 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 SMURF2Q9HAU4 748 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 TPT1P8Q9HAU6 139 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 PLGRKTQ9HBL7 147 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 CRLF2Q9HC73 371 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 ESM1Q9NQ30 184 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 G6PC2Q9NQR9 355 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 TREM2Q9NZC2 230 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 BAG5Q9UL15 447 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 RCE1Q9Y256 329 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 SNX5Q9Y5X3 404 aa7.89□□□□□ -1.15
CHMP4A-205ENST00000531158 LOC105371242A0A075B767 164 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 TRAF3IP2O43734 574 aaPredicted RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF682O95780 498 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 HLA-HP01893 362 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 MSMBP08118 114 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 GAAP10253 952 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF35P13682 527 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 HOXB1P14653 301 aaPredicted RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF14P17017 642 aaPredicted RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ARR3P36575 388 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ALDH3B1P43353 468 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 RPS5P46782 204 aaKnown RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 YAP1P46937 504 aaKnown RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ACTG1P63261 375 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 HOXC5Q00444 222 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 NEDD8Q15843 81 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 GPR107Q5VW38 600 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 WBP2NLQ6ICG8 309 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 FAHD1Q6P587 224 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 NHLRC1Q6VVB1 395 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 TMEM179BQ7Z7N9 219 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 SPARTQ8N0X7 666 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 SVOPQ8N4V2 548 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ANKK1Q8NFD2 765 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 OR52P1PQ8NH57 321 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 FAM216AQ8WUB2 273 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 BORCS5Q969J3 196 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 PPP1R14BQ96C90 147 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 HSH2DQ96JZ2 352 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 OR2M2Q96R28 347 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 SYT3Q9BQG1 590 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 TAPBPLQ9BX59 468 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 GABARAPL3Q9BY60 117 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 TMEM38AQ9H6F2 299 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 REEP1Q9H902 201 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 MTHFD2LQ9H903 347 aaPredicted RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF275Q9NSD4 429 aaPredicted RBP7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 VNN3Q9NY84 501 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 RASD1Q9Y272 281 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 TPRKBQ9Y3C4 175 aa7.88□□□□□ -1.15
CHMP4A-205ENST00000531158 IGKV1D-42A0A075B6H8 117 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF99A8MXY4 864 aaPredicted RBP7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 M0R233 179 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 GABARAPO95166 117 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 HTR1AP08908 422 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 SAGP10523 405 aaPredicted RBP7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 NR2F1P10589 423 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 HLA-DOBP13765 273 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 ETFAP13804 333 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 EPHA1P21709 976 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 GPR6P46095 362 aaPredicted RBP7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 CSNK2BP67870 215 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 RGNQ15493 299 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 GCNT6Q5T4J0 391 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 LAIR2Q6ISS4 152 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF621Q6ZSS3 439 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 CCDC80Q76M96 950 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 PEG10Q86TG7 708 aaKnown RBP7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF584Q8IVC4 421 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 HS3ST5Q8IZT8 346 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 MFSD8Q8NHS3 518 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 FGFBP3Q8TAT2 258 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 TBC1D15Q8TC07 691 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 SLC38A5Q8WUX1 472 aa7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 IPCEF1Q8WWN9 437 aaPredicted RBP7.87□□□□□ -1.15
CHMP4A-205ENST00000531158 SLC25A36Q96CQ1 311 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms