RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 RBMS3Q6XE24 437 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 SLC30A8Q8IWU4 369 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 SLC25A40Q8TBP6 338 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ST7LQ8TDW4 575 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 IPCEF1Q8WWN9 437 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 POP5Q969H6 163 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 NABP1Q96AH0 204 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 LRRC58Q96CX6 371 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 NMD3Q96D46 503 aaKnown RBP12.63□□□□□ -0.39
CAPN1-219ENST00000530495 DIRC2Q96SL1 478 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 OR2J1Q9GZK6 312 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 TMBIM4Q9HC24 238 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
CAPN1-219ENST00000530495 ISPDA4D126 451 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 MCIDASD6RGH6 385 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 ICMTO60725 284 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 SLC2A10O95528 541 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 IGF2P01344 180 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 VIMP08670 466 aaKnown RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 TSPAN19P0C672 248 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 PRTN3P24158 256 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 AQP2P41181 271 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 GDI2P50395 445 aaKnown RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 PSG4Q00888 419 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF771Q7L3S4 317 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 DOK3Q7L591 496 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 DPP10Q8N608 796 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 SIGLECL1Q8N7X8 197 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 DEFB108BQ8NET1 73 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 LIPHQ8WWY8 451 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 TAMM41Q96BW9 452 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 GPA33Q99795 319 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 RABEP2Q9H5N1 569 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 KAT8Q9H7Z6 458 aaKnown RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 NANOGQ9H9S0 305 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 UBAP1Q9NZ09 502 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 STX18Q9P2W9 335 aaKnown RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 CGGBP1Q9UFW8 167 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 NUP50Q9UKX7 468 aa12.62□□□□□ -0.39
CAPN1-219ENST00000530495 POLR3KQ9Y2Y1 108 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-219ENST00000530495 NPIPB13A6NJU9 1138 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 NPIPB4C9JG80 1138 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 H3BSA7 217 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 OR7A10O76100 309 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 IGHV2-70P01814 119 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
CAPN1-219ENST00000530495 MTPNP58546 118 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 PPP1CBP62140 327 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 SELPLGQ14242 412 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 SGCAQ16586 387 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 SPRNQ5BIV9 151 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 SLC25A47Q6Q0C1 308 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 RASSF5Q8WWW0 418 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 CGREF1Q99674 301 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 MMP26Q9NRE1 261 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 PURGQ9UJV8 347 aaKnown RBP12.61□□□□□ -0.39
CAPN1-219ENST00000530495 NDUFAF1Q9Y375 327 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 NPTNQ9Y639 398 aa12.61□□□□□ -0.39
CAPN1-219ENST00000530495 IGKV1D-43A0A0B4J1Z2 117 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 TRAPPC2LH3BP13 241 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 NGFP01138 241 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 SBK2P0C263 348 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 PCGF2P35227 344 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 SLC6A9P48067 706 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 CRYBA2P53672 197 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ERVK-25P63136 954 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF154Q13106 437 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 CDK5R2Q13319 367 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-219ENST00000530495 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
CAPN1-219ENST00000530495 RFPL4BQ6ZWI9 263 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 CCDC80Q76M96 950 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 DHDDSQ86SQ9 333 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 NKAIN4Q8IVV8 208 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ALDH16A1Q8IZ83 802 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 MOSPD2Q8NHP6 518 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 PFN4Q8NHR9 129 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 LRRC8CQ8TDW0 803 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 TMEM255BQ8WV15 326 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
CAPN1-219ENST00000530495 HDAC2Q92769 488 aaKnown RBP12.6□□□□□ -0.39
CAPN1-219ENST00000530495 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 C1QTNF5Q9BXJ0 243 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 WNT5BQ9H1J7 359 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ZMAT3Q9HA38 289 aaKnown RBP12.6□□□□□ -0.39
CAPN1-219ENST00000530495 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 NPHS2Q9NP85 383 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 C20orf141Q9NUB4 165 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 PLEK2Q9NYT0 353 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 ZNF69Q9UC07 566 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 EGFL7Q9UHF1 273 aa12.6□□□□□ -0.39
CAPN1-219ENST00000530495 TIMM10BQ9Y5J6 103 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms