RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZSCAN5BA6NJL1 495 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 CENPBD1B2RD01 187 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 OR5F1O95221 314 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 RBM34P42696 430 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 MOGQ16653 247 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 SLC25A47Q6Q0C1 308 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 HDDC2Q7Z4H3 204 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 IGFN1Q86VF2 1251 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 CALHM3Q86XJ0 350 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 OR4M2Q8NGB6 313 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 FAM216AQ8WUB2 273 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 GEMIN6Q8WXD5 167 aaKnown RBP17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 STON2Q8WXE9 905 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 C22orf15Q8WYQ4 148 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 ELMOD3Q96FG2 381 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 MAGEB18Q96M61 343 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 GAL3ST1Q99999 423 aa17.6■□□□□ 0.41
TSPAN4-219ENST00000530404 TMEM89A2RUT3 159 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 TRIM77I1YAP6 450 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 TSPAN19P0C672 248 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 FUT4P22083 530 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 GDI2P50395 445 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 LCN2P80188 198 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 C3orf56Q8N813 242 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 ABHD4Q8TB40 342 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 KLF14Q8TD94 323 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 TSPEARQ8WU66 669 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 RAB1CQ92928 201 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 TIMD4Q96H15 378 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 WNT5BQ9H1J7 359 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 TXNIPQ9H3M7 391 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 ESM1Q9NQ30 184 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 DCAF16Q9NXF7 216 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 UBAP1Q9NZ09 502 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 EIF3KQ9UBQ5 218 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 MED31Q9Y3C7 131 aa17.59■□□□□ 0.41
TSPAN4-219ENST00000530404 PLSCR5A0PG75 271 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 FXYD1O00168 92 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 NGFP01138 241 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 VIMP08670 466 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 LAP3P28838 519 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 COMPP49747 757 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 ARFIP2P53365 341 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 CYLC2Q14093 348 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 ALG10Q5BKT4 473 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 FAM209AQ5JX71 171 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 USP43Q70EL4 1123 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 MICU2Q8IYU8 434 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 ECSITQ9BQ95 431 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 OR2H1Q9GZK4 316 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 MSL2Q9HCI7 577 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 BAG5Q9UL15 447 aa17.58■□□□□ 0.4
TSPAN4-219ENST00000530404 SPRY1O43609 319 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 EDF1O60869 148 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 UBOX5O94941 541 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 PPP1CBP62140 327 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 SF3A3Q12874 501 aaKnown RBP eCLIP17.57■□□□□ 0.43e-13■■■■■ 49.7
TSPAN4-219ENST00000530404 LRRC23Q53EV4 343 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 MBNL2Q5VZF2 373 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 ZNF774Q6NX45 483 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 LIPHQ8WWY8 451 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 LRRC58Q96CX6 371 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 RBM4Q9BWF3 364 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 SUCNR1Q9BXA5 334 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 C7orf69Q9H7B7 122 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 SMURF2Q9HAU4 748 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 STX18Q9P2W9 335 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 OPN4Q9UHM6 478 aa17.57■□□□□ 0.4
TSPAN4-219ENST00000530404 A0A1W2PPL8 197 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 IGF2P01344 180 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 IFI30P13284 250 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 EGR1P18146 543 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 CTXN1P60606 82 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 RPL27P61353 136 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 BPIFB2Q8N4F0 458 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 TEX29Q8N6K0 151 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 ZDHHC22Q8N966 263 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 NANPQ8TBE9 248 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 TPD52L3Q96J77 140 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 ZNF583Q96ND8 569 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 DCLRE1CQ96SD1 692 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 TMEM120AQ9BXJ8 343 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 POLR2J2Q9GZM3 115 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 POLR2J3Q9H1A7 115 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 POFUT1Q9H488 388 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 HIF3AQ9Y2N7 669 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 CMYA5Q8N3K9 4069 aa17.56■□□□□ 0.4
TSPAN4-219ENST00000530404 TRAV27A0A087WT01 109 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 H7C1C5 153 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 J3QLI3 93 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 WIPF1O43516 503 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 SCG5P05408 212 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 YAP1P46937 504 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 LCN6P62502 163 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 CYBRD1Q53TN4 286 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 FAM27BQ5VT28 67 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 OR8J3Q8NGG0 315 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 C10orf82Q8WW14 230 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 BPIFA2Q96DR5 249 aa17.55■□□□□ 0.4
TSPAN4-219ENST00000530404 JMJD8Q96S16 334 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms