RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PGA3P0DJD8 388 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 CBR1P16152 277 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 AQP2P41181 271 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 RANBP1P43487 201 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 RPL5P46777 297 aaKnown RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 CSNK1A1P48729 337 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 GZMKP49863 264 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 UBE2NP61088 152 aaKnown RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 FHL1Q13642 323 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MELKQ14680 651 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 C3orf36Q3SXR2 165 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 IQCCQ4KMZ1 466 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 VAX1Q5SQQ9 334 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 C11orf71Q6IPW1 123 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 KLHL24Q6TFL4 600 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 HIST3H2AQ7L7L0 130 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 NANOGNBQ7Z5D8 188 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MYPOPQ86VE0 399 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 OFCC1Q8IZS5 231 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 PGAM4Q8N0Y7 254 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 FAM156AQ8NDB6 213 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 OR6N1Q8NGY5 312 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MOSPD2Q8NHP6 518 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 NRG4Q8WWG1 115 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 HIST1H2ACQ93077 130 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 SLC25A44Q96H78 314 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 C7orf34Q96L11 122 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF75AQ96N20 296 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 SEPHS2Q99611 448 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MRPL13Q9BYD1 178 aaKnown RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 GORASP2Q9H8Y8 452 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 SEC61A2Q9H9S3 476 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 NOX3Q9HBY0 568 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 DCAF13Q9NV06 445 aaKnown RBP7.31□□□□□ -1.24
SSBP3-212ENST00000528930 FAIMQ9NVQ4 179 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 ADA2Q9NZK5 511 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF224Q9NZL3 707 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 TAGLN3Q9UI15 199 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MOKQ9UQ07 419 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 MED31Q9Y3C7 131 aa7.31□□□□□ -1.24
SSBP3-212ENST00000528930 HTR3EA5X5Y0 456 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MEGF11A6BM72 1044 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CASQ2O14958 399 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 DENRO43583 198 aaKnown RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 BCL10O95999 233 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CECR9P0C854 216 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 IFI30P13284 250 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 HSD17B1P14061 328 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MAKP20794 623 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CALCRP30988 508 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 NAAAQ02083 359 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 PRKCDQ05655 676 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 TRAM2Q15035 370 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 RCN1Q15293 331 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 HIST3H3Q16695 136 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MST1LQ2TV78 715 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ARMC4Q5T2S8 1044 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 AGAP6Q5VW22 663 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF544Q6NX49 715 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 TBPL2Q6SJ96 375 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF813Q6ZN06 617 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 FKBP9P1Q75LS8 142 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MDP1Q86V88 176 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 NRMQ8IXM6 262 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CCDC36Q8IYA8 594 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 RNF113BQ8IZP6 322 aaKnown RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MUC15Q8N387 334 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 FAM86B1Q8N7N1 296 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 LRRC75AQ8NAA5 344 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 FGFBP3Q8TAT2 258 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ASB10Q8WXI3 467 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ZNF566Q969W8 418 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 MCUR1Q96AQ8 359 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 BPIFA2Q96DR5 249 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CDRT15Q96T59 188 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 FOXB1Q99853 325 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 KATNB1Q9BVA0 655 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 FNDC11Q9BVV2 318 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ULBP2Q9BZM5 246 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 NMNAT1Q9HAN9 279 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 BARX1Q9HBU1 254 aaPredicted RBP7.3□□□□□ -1.24
SSBP3-212ENST00000528930 B3GAT2Q9NPZ5 323 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 INIPQ9NRY2 104 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 CBLN4Q9NTU7 201 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 TAS2R1Q9NYW7 299 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 RPS6KA6Q9UK32 745 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 POU2F3Q9UKI9 436 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 POFUT2Q9Y2G5 429 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 ENPP4Q9Y6X5 453 aa7.3□□□□□ -1.24
SSBP3-212ENST00000528930 NOTCH3Q9UM47 2321 aa7.29□□□□□ -1.24
SSBP3-212ENST00000528930 A0A1W2PRG6 482 aa7.29□□□□□ -1.24
SSBP3-212ENST00000528930 NPIPB13A6NJU9 1138 aa7.29□□□□□ -1.24
SSBP3-212ENST00000528930 CENPBD1B2RD01 187 aa7.29□□□□□ -1.24
SSBP3-212ENST00000528930 NPIPB4C9JG80 1138 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms